www.vaa3d.org : download the latest Binary version here https://github.com/Vaa3D/release/releases/tag/v3.200
☆42Sep 26, 2025Updated last year
Alternatives and similar repositories for v3d_external
Users that are interested in v3d_external are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- www.vaa3d.org☆114Apr 25, 2024Updated 2 years ago
- Binary releases of Vaa3D and related software components☆45Nov 11, 2023Updated 2 years ago
- www.vaa3d.org☆80Mar 22, 2018Updated 8 years ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆73Nov 16, 2022Updated 3 years ago
- ☆12Mar 25, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆94Mar 5, 2024Updated 2 years ago
- Documentations of BigNeuron Project progress☆24Feb 3, 2016Updated 10 years ago
- ☆16Nov 2, 2016Updated 9 years ago
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Mar 4, 2022Updated 4 years ago
- dataset info for the neurofinder challenge☆13Aug 3, 2016Updated 10 years ago
- btmorph v2. Object-oriented library to analyze neuronal structure☆12Sep 30, 2017Updated 9 years ago
- NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neuron…☆79Sep 29, 2026Updated 2 weeks ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Legacy project superseded by https://github.com/morphonets/SNT☆13Jul 19, 2021Updated 5 years ago
- The framework for quantification of neuronal anatomy☆62Updated this week
- Create 3D/4D animations using a natural language-based syntax☆60Jun 6, 2025Updated last year
- ☆11Nov 2, 2023Updated 2 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- A curated list of awesome Janelia software☆17Feb 26, 2025Updated last year
- Semi-manual alignment to reference templates (SMART): An open source pipeline in R for whole brain mapping☆15Oct 27, 2021Updated 4 years ago
- A Framework for Chromatin Architecture Data Processing, Handling and Analysis☆12Updated this week
- ☆12Dec 12, 2018Updated 7 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆15Jan 13, 2020Updated 6 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Jul 14, 2019Updated 7 years ago
- Hardware documentation for the mesoSPIM microscope project☆35Jun 17, 2026Updated 3 months ago
- Set of Dockerfile to build a ready-to-use OMERO server☆15Oct 5, 2017Updated 9 years ago
- Read and write files from the BrainGlobe neuroanatomy suite☆15Oct 6, 2026Updated last week
- ☆11Jun 22, 2026Updated 3 months ago
- A Primer on Motion Capture with Deep Learning:Principles, Pitfalls and Perspectives☆22Sep 11, 2021Updated 5 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆55Jun 1, 2025Updated last year
- Paper Statistics for CVPR‘22☆14Jun 1, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Tools for distributed alignment of massive images☆95Updated this week
- UPenn ?☆21Oct 5, 2026Updated last week
- Neuronal Morphology Analysis Tool☆109Feb 26, 2025Updated last year
- Dendritic Spine Analysis Software☆11Apr 27, 2023Updated 3 years ago
- Converter for different neuro-imaging file formats.☆19Oct 29, 2017Updated 8 years ago
- swc to vtk converter for visualization of neuron and neural circuit simulation in ParaView☆12Jan 26, 2018Updated 8 years ago
- SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.☆25Jan 8, 2023Updated 3 years ago