Vaa3D / v3d_external
www.vaa3d.org : download the latest Binary version here https://github.com/Vaa3D/release/releases/tag/v3.200
☆41Updated last week
Related projects ⓘ
Alternatives and complementary repositories for v3d_external
- www.vaa3d.org☆108Updated 7 months ago
- www.vaa3d.org☆78Updated 6 years ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆66Updated 2 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆63Updated 3 years ago
- Binary releases of Vaa3D and related software components☆43Updated last year
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆82Updated 8 months ago
- ☆36Updated 8 months ago
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆114Updated this week
- Very fast greedy diffeomorphic registration code☆67Updated last month
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆50Updated 2 months ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆58Updated 4 years ago
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆212Updated 2 months ago
- A napari plugin for itk-elastix☆38Updated 5 months ago
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆80Updated 2 months ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆44Updated last week
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆40Updated 4 months ago
- FluoRender is an interactive tool for confocal microscopy data analysis.☆41Updated this week
- Simple pure-python module for reading and writing nrrd files.☆116Updated 2 weeks ago
- An open-source application for the analysis and visualization of segmented vasculature datasets☆102Updated 6 months ago
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆49Updated 2 weeks ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Updated last year
- Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.☆77Updated 3 months ago
- Tools for distributed alignment of massive images☆75Updated last week
- Documentations of BigNeuron Project progress☆24Updated 8 years ago
- Official SuperElastix repository☆85Updated 5 years ago
- Developing a Brain Atlas through Deep Learning☆51Updated last year
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆49Updated last month
- Deep Learning for EM Connectomics☆14Updated 2 years ago
- Automated 3D brain registration with support for multiple species and atlases.☆124Updated last week