Vaa3D / v3d_externalLinks
www.vaa3d.org : download the latest Binary version here https://github.com/Vaa3D/release/releases/tag/v3.200
☆42Updated 2 months ago
Alternatives and similar repositories for v3d_external
Users that are interested in v3d_external are comparing it to the libraries listed below
Sorting:
- www.vaa3d.org☆110Updated last year
- www.vaa3d.org☆79Updated 7 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆86Updated last year
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆69Updated 2 years ago
- Binary releases of Vaa3D and related software components☆45Updated last year
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆55Updated last month
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆73Updated 3 years ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆76Updated 2 weeks ago
- Official SuperElastix repository☆87Updated 6 years ago
- Aligner for large scale serial section image data☆16Updated 2 years ago
- FluoRender is an interactive tool for fluorescence microscopy data visualization and analysis☆45Updated last week
- Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the Universit…☆114Updated last year
- Software package for neuron reconstruction and visualization☆39Updated 2 months ago
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆161Updated 2 weeks ago
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆123Updated 2 weeks ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆50Updated 2 weeks ago
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆245Updated 2 weeks ago
- An open-source application for the analysis and visualization of segmented vasculature datasets☆118Updated last year
- A napari plugin for itk-elastix☆39Updated last year
- Image mapping using the LDDMM algorithm, implemented in tensorflow☆16Updated 3 years ago
- The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core librarie…☆197Updated 5 months ago
- A suite of tools for medical image processing focused on brain analysis☆124Updated last month
- The U-Net Segmentation plugin for Fiji (ImageJ)☆88Updated 2 years ago
- Simple pure-python module for reading and writing nrrd files.☆122Updated 6 months ago
- Deep Learning for EM Connectomics☆15Updated 2 years ago
- A library to facilitate machine learning on multi-dimensional images.☆85Updated this week
- Python scripts to read and write the CREMI hdf5 file format.☆38Updated 2 years ago
- A python algorithm for tracking cells in 3D time lapse images.☆62Updated 4 months ago
- Distributed segmentation for bio-image-analysis☆38Updated 2 months ago