Various Ideas for Protein Masked LM with ESMFold/ESM-2
☆15Aug 17, 2023Updated 3 years ago
Alternatives and similar repositories for esm2_masked_lm
Users that are interested in esm2_masked_lm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2☆12Dec 10, 2023Updated 2 years ago
- A novel method that quantitatively evaluates the impact of PLM in PLI predictions.☆12Sep 14, 2023Updated 3 years ago
- Binding Affinity Prediction using Deep learning models☆12Jun 9, 2021Updated 5 years ago
- Compute protein contact map from PDB file.☆12May 23, 2017Updated 9 years ago
- ☆15Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- explainable-machine-translation-metrics☆12Jul 15, 2022Updated 4 years ago
- ☆50Apr 26, 2024Updated 2 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- Official implementation for the paper "EBMDOCK: NEURAL PROBABILISTIC PROTEIN-PROTEIN DOCKING VIA A DIFFERENTIABLE ENERGY-BASED MODEL" (IC…☆14Apr 24, 2024Updated 2 years ago
- test☆14Nov 13, 2020Updated 5 years ago
- Code associated with the publication 'Generative and predictive neural networks for the design of functional RNA molecules'☆16Apr 8, 2025Updated last year
- ☆13Aug 26, 2026Updated 3 weeks ago
- AIMNet2: Fast, accurate and transferable neural network interatomic potential☆19Oct 17, 2024Updated last year
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆14Apr 23, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Webserver and command line tool for annotating engineered plasmids☆17May 19, 2026Updated 4 months ago
- Official code repository for the paper Exploring Chemical Space with Score-based Out-of-distribution Generation (ICML 2023)☆41May 19, 2024Updated 2 years ago
- 手写了卷积神经网络内核,来处理图上的节点分类与链路预测任务,在三个数据集cora,citeseer,ppi上进行试验,并分析了自环、层数、DropEdge、PairNorm、激活函数等因素对模型的分类和预测性能的影响。☆15May 10, 2023Updated 3 years ago
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆18May 15, 2026Updated 4 months ago
- Generate statistics from FASTQ and FASTA files. Also manipulate sequences such as renaming/sorting contigs and converting FASTQ to FASTA.…☆16Jul 14, 2026Updated 2 months ago
- ☆52Jun 4, 2025Updated last year
- Leveraging protein-language models for virtual screening☆27Jun 5, 2024Updated 2 years ago
- This is the repository for the ManufacturingNet project.☆12May 30, 2024Updated 2 years ago
- Molecular visualization for MDAnalysis with MolecularNodes in Blender☆21Mar 30, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Genomics resources for the Long-Term Evolution Experiment with E. coli☆20Jul 11, 2026Updated 2 months ago
- 10k protein structures, no time limit, best val loss wins☆67Jul 9, 2026Updated 2 months ago
- Started as a Team Project for CS690D at UMass Amherst, now turning into pytorch implementation of hyperbolic neural networks using Poinca…☆12Dec 8, 2022Updated 3 years ago
- ☆20Jul 1, 2023Updated 3 years ago
- A simple but powerful VSCode extension for visualizing protein structures using the Molstar framework.☆38Jul 15, 2026Updated 2 months ago
- The MULTICOM4 protein structure prediction system developed by the Bioinformatics and Machine Learning Lab at the University of Missouri …☆17Aug 12, 2026Updated last month
- My solutions to puzzles released monthly from Jane Street☆14Jun 8, 2024Updated 2 years ago
- Piece-wise Linear curves converted to point-clouds, analysed with Persistent Homology, represented as HyperGraphs.☆16Jun 22, 2026Updated 2 months ago
- Protein prediction models implemented with Modal☆34Aug 12, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆27Feb 10, 2024Updated 2 years ago
- ☆13May 18, 2025Updated last year
- [EMNLP 2023] ReLM: Leveraging Language Models for Enhanced Chemical Reaction Prediction.☆23Jan 28, 2024Updated 2 years ago
- AI-powered macromolecular refinement☆51Apr 26, 2026Updated 4 months ago
- ☆18Dec 13, 2023Updated 2 years ago
- Features Based Conformational Clustering of MD trajectories. See details at:☆11Aug 1, 2026Updated last month
- A LLM-based Agent Framework for Drug Discovery☆23Jan 11, 2026Updated 8 months ago