Alternatives and similar repositories for aisynphys

Users that are interested in aisynphys are comparing it to the libraries listed below

• AllenInstitute / patchseqtools
  QC and cell type assignment for patch-seq transcriptomics data
  ☆20Updated last year
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆98Updated this week
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆37Updated last year
• AllenInstitute / openscope_databook
  OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…
  ☆66Updated last month
• AllenInstitute / biophys_optimize
  Optimization of single-cell biophysically detailed models
  ☆15Updated 4 years ago
• AllenInstitute / neuron_morphology
  Tools for working with single-neuron morphological reconstructions
  ☆21Updated last year
• INM-6 / viziphant
  Visualization of electrophysiological data from Elephant
  ☆24Updated 7 months ago
• Whitlock-Group / HERBS
  ☆51Updated 9 months ago
• AllenInstitute / ipfx
  computes intrinsic cell features from intracellular electrophysiology data
  ☆27Updated 7 months ago
• INM-6 / networkunit
  A SciUnit library for validation testing of spiking neural network models.
  ☆16Updated 10 months ago
• ProjectPyRhO / PyRhO
  A virtual optogenetics laboratory
  ☆37Updated last year
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• NeurodataWithoutBorders / nwb-schema
  Data format specification schema for the NWB neurophysiology data format
  ☆57Updated last week
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆57Updated 2 weeks ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆46Updated 5 years ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆98Updated this week
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆51Updated last year
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆59Updated this week
• MetaCell / nwb-explorer
  NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files
  ☆24Updated 3 months ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• NII-Kobayashi / GLMCC
  GLMCC: The generalized linear model for spike cross-correlation (Kobayashi et al., Nature Communications, 2019)
  ☆35Updated 2 years ago
• JoramKeijser / MIND
  Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18
  ☆29Updated 6 years ago
• AllenInstitute / brain_observatory_examples
  Gallery of visualizations and analyses of the Allen Brain Observatory
  ☆24Updated 2 years ago
• murthylab / GLMHMM
  ☆23Updated 5 years ago
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆50Updated 3 years ago
• voytekresearch / OscillatoryOrganoids
  Code for analyzing multi-electrode array recordings (spikes & LFP) for Trujillo, Gao, Negraes et al., 2019.
  ☆15Updated 5 years ago
• flatironinstitute / kachery-cloud
  ☆21Updated 7 months ago
• flatironinstitute / spikeforest2
  SpikeForest -- spike sorting analysis for website -- version 2
  ☆34Updated 2 years ago
• flatironinstitute / dendro-old
  Analyze neuroscience data in the cloud
  ☆18Updated 8 months ago
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆95Updated 4 months ago