AllenInstitute / aisynphysLinks
Analysis tools specific to the aiephys multipatch project.
☆12Updated 3 months ago
Alternatives and similar repositories for aisynphys
Users that are interested in aisynphys are comparing it to the libraries listed below
Sorting:
- NEural MOdelS, a statistical modeling framework for neuroscience.☆119Updated this week
- Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18☆30Updated 6 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆107Updated this week
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆75Updated 6 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- IaC codebase for the NeuroCAAS Platform☆39Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 3 weeks ago
- QC and cell type assignment for patch-seq transcriptomics data☆24Updated last year
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- Notebooks from the workshop tutorial implementing and discussing a range of generative models commonly used in neuroscience.☆39Updated 2 years ago
- Browser-based NWB visualization and DANDI exploration☆62Updated this week
- Analyze neuroscience data in the cloud☆19Updated last year
- a visualization method for neural data☆241Updated 10 months ago
- pynapple collaborative data analysis (high level python scripts)☆38Updated 2 months ago
- Region Of Interest Classification and Tracking☆27Updated this week
- ☆24Updated 6 years ago
- Bayesian learning and inference for state space models☆14Updated 4 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 3 months ago
- Data format specification schema for the NWB neurophysiology data format☆61Updated last week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- Algorithm for automated source extraction from 1P data☆23Updated 2 years ago
- Gallery of visualizations and analyses of the Allen Brain Observatory☆25Updated 3 years ago
- Calcium Data Extraction and Analysis☆49Updated 3 years ago
- ☆52Updated last year
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- IBL core shared libraries☆66Updated this week
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated last week
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆32Updated 2 years ago
- Python package providing mesoscale connectivity models for mouse.☆39Updated last year
- Deconvolution of calcium imaging data☆105Updated last year