Alternatives and similar repositories for aisynphys:

Users that are interested in aisynphys are comparing it to the libraries listed below

• AllenInstitute / patchseqtools
  QC and cell type assignment for patch-seq transcriptomics data
  ☆18Updated 9 months ago
• AllenInstitute / openscope_databook
  OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…
  ☆64Updated 3 weeks ago
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆96Updated this week
• AllenInstitute / ipfx
  computes intrinsic cell features from intracellular electrophysiology data
  ☆27Updated 3 months ago
• JoramKeijser / MIND
  Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18
  ☆26Updated 5 years ago
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆36Updated last year
• schultzlab / Neural_Manifolds
  A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…
  ☆25Updated last year
• flatironinstitute / kachery-cloud
  ☆23Updated 3 months ago
• murthylab / GLMHMM
  ☆22Updated 5 years ago
• Whitlock-Group / HERBS
  ☆52Updated 5 months ago
• AllenInstitute / biophys_optimize
  Optimization of single-cell biophysically detailed models
  ☆15Updated 4 years ago
• AllenInstitute / neuron_morphology
  Tools for working with single-neuron morphological reconstructions
  ☆21Updated 9 months ago
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆51Updated this week
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• INM-6 / viziphant
  Visualization of electrophysiological data from Elephant
  ☆22Updated 3 months ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• flatironinstitute / dendro-old
  Analyze neuroscience data in the cloud
  ☆19Updated 5 months ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆89Updated this week
• simonarvin / braincoordinator
  Open-source stereotaxic coordinator
  ☆15Updated 2 years ago
• petersaj / AP_histology
  Histology processing
  ☆65Updated 10 months ago
• AllenInstitute / brain_observatory_examples
  Gallery of visualizations and analyses of the Allen Brain Observatory
  ☆24Updated 2 years ago
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆50Updated 3 years ago
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆52Updated last year
• pillowlab / GLMspiketraintutorial_python
  ☆49Updated 2 years ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated 10 months ago
• awillats / dynamics-in-neuro-reading-list
  This reading list is centered around the practical application of linear dynamical systems models to predict neural data
  ☆36Updated 3 years ago
• calebweinreb / SNUB
  ☆26Updated 7 months ago
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆16Updated this week
• brainglobe / brainglobe-atlasapi
  A Python interface to access neuroanatomical atlases
  ☆129Updated this week
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆44Updated 5 years ago