EricKenjiLee / WaveMAP_PaperLinks
This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linear Dimensionality Reduction on Extracellular Waveforms Reveals Physiological, Functional, and Laminar Diversity in Premotor Cortex.
☆25Updated 3 weeks ago
Alternatives and similar repositories for WaveMAP_Paper
Users that are interested in WaveMAP_Paper are comparing it to the libraries listed below
Sorting:
- Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data☆55Updated 9 months ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated last week
- Tools for analyzing spiking data from single-neuron recodings.☆29Updated 3 weeks ago
- IBL core shared libraries☆66Updated last week
- Tutorials for using SpikeInterface on extracellular datasets.☆68Updated 2 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 4 months ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated last week
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 6 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆106Updated last week
- Fast and scalable spike sorting in python☆95Updated 5 months ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆46Updated 3 weeks ago
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆32Updated last year
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆58Updated 9 months ago
- Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data☆134Updated last month
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆138Updated 2 weeks ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆30Updated 2 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆32Updated 4 months ago
- Lightweight electrophysiological data analysis library☆16Updated 2 weeks ago
- MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…☆46Updated 6 years ago
- Machine Learning Methods for Neural Data Analysis☆20Updated 7 months ago
- MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…☆17Updated 3 years ago
- Cycle-by-cycle analysis of neural oscillations.☆93Updated 2 months ago
- Preferential Subspace Identification Algorithm☆54Updated last week
- pynapple collaborative data analysis (high level python scripts)☆38Updated 3 weeks ago
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Updated 6 years ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Code for Functional Mixed Models for Fiber Photometry☆13Updated 5 months ago