AllenNeuralDynamics / aind-data-schemaLinks
A library that defines AIND data schema and validates JSON.
☆28Updated this week
Alternatives and similar repositories for aind-data-schema
Users that are interested in aind-data-schema are comparing it to the libraries listed below
Sorting:
- Collection of probe description for probeinterface☆17Updated last week
- ☆52Updated last year
- Browser-based NWB visualization and DANDI exploration☆62Updated this week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆13Updated 2 years ago
- Histology processing☆72Updated last month
- A package to manage electrophysiology analysis.☆22Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆81Updated 9 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆41Updated last month
- Registration of cells across sessions.☆76Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 2 weeks ago
- A gui for browsing joint calcium imaging + behavioral data.☆55Updated last year
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆20Updated last month
- Open Neurophysiology Environment☆21Updated this week
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated 2 years ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated last month
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆67Updated last month
- ☆10Updated 2 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆47Updated this week
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Updated last week
- Calcium imaging inter-session alignment☆15Updated last month
- pyqt5 dependent applications for IBL sessions☆32Updated last week
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated last week