Alternatives and similar repositories for aind-data-schema:

Users that are interested in aind-data-schema are comparing it to the libraries listed below

• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆92Updated 8 months ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆73Updated 6 months ago
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆95Updated 2 months ago
• Whitlock-Group / HERBS
  ☆51Updated 7 months ago
• AllenNeuralDynamics / aind-ephys-spikesort-kilosort25-full
  CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
  ☆11Updated last year
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆54Updated last week
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆52Updated this week
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆59Updated last month
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆56Updated last week
• SpikeInterface / probeinterface
  Python package to handle probe layout, geometry and wiring to device.
  ☆61Updated last month
• leomol / FPA
  Fiber photometry analysis
  ☆22Updated last week
• magland / sortingview
  Web app for viewing results of ephys spike sorting
  ☆25Updated last month
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆119Updated 2 months ago
• JorritMontijn / zetapy
  Python code implementing the ZETA-test
  ☆26Updated 2 weeks ago
• sanworks / Bpod_Gen2
  Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)
  ☆34Updated last week
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆22Updated 2 weeks ago
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆80Updated last year
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆26Updated last month
• petersaj / AP_histology
  Histology processing
  ☆65Updated last month
• zivlab / CellReg
  Registration of cells across sessions.
  ☆74Updated 7 months ago
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆62Updated last year
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 6 years ago
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆46Updated last year
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆56Updated this week
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆51Updated 2 months ago
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆114Updated 7 months ago
• BarbourLab / lussac
  Package for automatic post-processing and merging of multiple spike-sorting analyses.
  ☆25Updated last month
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year