Alternatives and similar repositories for MEA-NAP

Users that are interested in MEA-NAP are comparing it to the libraries listed below

• zashwood / ssm
  Bayesian learning and inference for state space models
  ☆14Updated 3 years ago
• petersaj / AP_histology
  Histology processing
  ☆71Updated 2 months ago
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆28Updated 3 years ago
• RDastgh1 / MEAnalyzer
  Analyze spike trains exported from multi-electrode arrays
  ☆14Updated last year
• Whitlock-Group / HERBS
  ☆52Updated last year
• AllenInstitute / brain_observatory_examples
  Gallery of visualizations and analyses of the Allen Brain Observatory
  ☆25Updated 3 years ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆142Updated 4 months ago
• tjd2002 / tjd-shared-code
  Neuroscience/electrophsyiology data analysis tools (mostly Matlab)
  ☆14Updated 6 years ago
• murthylab / GLMHMM
  ☆24Updated 5 years ago
• talialerner / Photometry-Analysis-Shared
  ☆12Updated 9 years ago
• zashwood / glm-hmm
  Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…
  ☆51Updated 2 years ago
• AllenInstitute / swdb_2022
  Repository to host materials for the summer workshop on the dynamic brain
  ☆30Updated 3 years ago
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated last year
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆156Updated last month
• SjulsonLab / generalized_contrastive_PCA
  Method to find contrastive dimensions between experimental conditions
  ☆22Updated 6 months ago
• PolarBean / DeepSlice
  A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.
  ☆106Updated 2 months ago
• yetianmed / BioAge
  ☆15Updated 5 months ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆46Updated 6 years ago
• dstolz / epsych
  NEW v1.1: https://github.com/dstolz/epsych_v1.1 Epsych is a toolbox for extending Tucker-Davis Technologies hardware and sof…
  ☆15Updated 3 years ago
• golshanilab / UCLA_2P_Miniscope
  UCLA Multiphoton Miniature Microscope
  ☆15Updated 5 months ago
• LindenParkesLab / nctpy
  A toolbox for implementing Network Control Theory analyses in python
  ☆65Updated last year
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆118Updated 3 weeks ago
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆49Updated 6 months ago
• BarbourLab / lussac
  Package for automatic post-processing and merging of multiple spike-sorting analyses.
  ☆28Updated 2 weeks ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆78Updated 6 months ago
• netneurolab / hansen_genescognition
  Code supporting Hansen et al., 2021, Nature Human Behaviour "Mapping gene transcription and neurocognition across human neocortex".
  ☆22Updated 3 years ago
• AllenInstitute / openscope_databook
  OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…
  ☆73Updated 3 months ago
• cwindolf / dartsort
  ☆24Updated this week
• CaliAli-PV / CaliAli
  Calcium imaging inter-session alignment
  ☆13Updated 2 weeks ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated last year