The analysis repository for the Open Pediatric Cancer Project
☆24Jul 9, 2025Updated 8 months ago
Alternatives and similar repositories for OpenPedCan-analysis
Users that are interested in OpenPedCan-analysis are comparing it to the libraries listed below
Sorting:
- Alignment workflow for Kids-First DRC☆11Feb 12, 2026Updated 3 weeks ago
- The analysis repository for the Open Pediatric Brain Tumor Atlas Project☆107Jun 21, 2023Updated 2 years ago
- Data for analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆16Aug 13, 2025Updated 6 months ago
- Pan-cancer human brain metastases atlas at single-cell resolution☆23Apr 3, 2025Updated 11 months ago
- UMLS Graph database for semantic queries☆26Jan 11, 2023Updated 3 years ago
- ☆24Feb 23, 2026Updated 2 weeks ago
- A software package for connecting cell level features in single cell RNA sequencing data with receptor ligand activity. Please be aware t…☆19Dec 5, 2024Updated last year
- Organizational Material☆10Aug 18, 2020Updated 5 years ago
- ☆31Apr 9, 2022Updated 3 years ago
- Code for the "Spatial genomics maps the structure, nature and evolution of cancer clones" paper☆27Nov 21, 2022Updated 3 years ago
- Somatic point mutation caller☆34Jan 7, 2026Updated 2 months ago
- ☆14Jul 1, 2025Updated 8 months ago
- Analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆12Sep 30, 2024Updated last year
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆36Updated this week
- Tools for doing x way meta-analysis☆12Apr 12, 2022Updated 3 years ago
- Simultaneous deep generative modeling and clustering of single cell genomic data☆32Nov 14, 2022Updated 3 years ago
- InstaPrism is an R package for fast implementation of BayesPrism☆48Jun 3, 2024Updated last year
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆11May 19, 2019Updated 6 years ago
- A comparison of various moving window median algorithms☆17Jun 4, 2011Updated 14 years ago
- A repository for the Petagraph project☆14Dec 11, 2025Updated 2 months ago
- Pipeline for demultiplexing and aligning both ATAC and RNA data generated in SHARE-seqV2☆16Apr 21, 2023Updated 2 years ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- A package for the analysis of Imaging Mass Cytometry data☆14Updated this week
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 2 years ago
- Software used by Trinity CTAT for building CTAT Genome Libs, resource databases shared by Trinity CTAT components☆10Apr 28, 2025Updated 10 months ago
- ☆49Sep 4, 2025Updated 6 months ago
- Tool suite for HGVS variant descriptions☆48Feb 23, 2026Updated 2 weeks ago
- ☆10Nov 30, 2024Updated last year
- R package for cleaning anthropometric (height and weight) data from electronic health record systems.☆17Feb 20, 2026Updated 2 weeks ago
- ☆11Oct 22, 2018Updated 7 years ago
- COVID19 profiling of lung tissue with imaging mass cytometry (IMC)☆11Mar 29, 2021Updated 4 years ago
- ☆11May 12, 2021Updated 4 years ago
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Dec 7, 2022Updated 3 years ago
- Post hoc cell type classification of single-cell RNA-sequencing data.☆10Oct 5, 2021Updated 4 years ago
- ☆12May 29, 2024Updated last year
- COMUNET: a tool to explore and visualize intercellular communication☆12Apr 15, 2020Updated 5 years ago
- Source code to accompany "A Deep Learning Model to Predict a Diagnosis of Alzheimer’s Disease Using 18F-FDG PET of the Brain"☆11Aug 18, 2018Updated 7 years ago
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆12Sep 15, 2023Updated 2 years ago
- Marshmallow serializer integration with pyspark☆12Dec 29, 2023Updated 2 years ago