A4Bio / RFold
The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching Perspective..
☆83Updated 6 months ago
Alternatives and similar repositories for RFold:
Users that are interested in RFold are comparing it to the libraries listed below
- The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.☆26Updated last year
- The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-base…☆39Updated 5 months ago
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆170Updated last year
- The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics☆172Updated 4 months ago
- The official implementation of the CVPR'2022 paper Hyperspherical Consistency Regularization.☆27Updated 2 years ago
- The official implementation of the ACM MM'21 paper Co-learning: Learning from noisy labels with self-supervision.☆119Updated 2 years ago
- ☆11Updated last year
- ☆39Updated 2 years ago
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Updated last year
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆83Updated last year
- ☆171Updated 4 months ago
- Official PyTorch implementation of "ProteinMAE: Masked Autoencoder for Protein Surface Self-supervised Learning".☆11Updated 8 months ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆70Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆91Updated last year
- Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure☆258Updated last year
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆58Updated 6 months ago
- ☆105Updated 3 months ago
- PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence da…☆91Updated 7 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆57Updated 3 months ago
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆91Updated last year
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆77Updated 9 months ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆53Updated 5 months ago
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆26Updated 11 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆99Updated 9 months ago
- Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.☆73Updated 3 weeks ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆50Updated 3 months ago
- GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)☆280Updated last year
- ☆102Updated last year
- ☆33Updated last year
- ☆21Updated this week