A4Bio / RFold
The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching Perspective..
☆85Updated 9 months ago
Alternatives and similar repositories for RFold:
Users that are interested in RFold are comparing it to the libraries listed below
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆176Updated last year
- The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.☆26Updated 2 years ago
- The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics☆179Updated 7 months ago
- The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-base…☆48Updated 8 months ago
- The official implementation of the ACM MM'21 paper Co-learning: Learning from noisy labels with self-supervision.☆120Updated 2 years ago
- ☆11Updated 2 years ago
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆96Updated last year
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆65Updated 2 months ago
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆10Updated last year
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Updated last year
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆12Updated 5 months ago
- Accelerate Molecular Biology Research with Machine Learning☆33Updated this week
- Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.☆112Updated 2 months ago
- 🏭 Easy data acquisition, benchmark resources, PLM fine-tuning for bio-researchers.☆77Updated this week
- ☆41Updated 2 years ago
- RiboNucleic Acid (RNA) Language Model☆97Updated 2 weeks ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆93Updated last year
- ☆30Updated last year
- ☆183Updated 7 months ago
- Official Implemetation of DPLM (ICML'24) - Diffusion Language Models Are Versatile Protein Learners☆153Updated last week
- Pretrainable geometric graph neural network for antibody affinity maturation☆52Updated last month
- GCNfold: A novel lightweight model with valid extractors for RNA secondary structure prediction☆14Updated last year
- Geometric deep learning of protein–DNA binding specificity☆64Updated last month
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆104Updated 2 months ago
- ☆64Updated 2 weeks ago
- open source code for Tencent tFold☆97Updated last month
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆151Updated last year
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆58Updated 8 months ago
- ☆68Updated 2 months ago
- ☆68Updated last week