The official implementation of the ICML'24 paper RFold: Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching Perspective..
☆88Jul 20, 2024Updated 2 years ago
Alternatives and similar repositories for RFold
Users that are interested in RFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The official implementation of the ACM MM'21 paper Co-learning: Learning from noisy labels with self-supervision.☆123May 17, 2022Updated 4 years ago
- The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-base…☆50Aug 22, 2024Updated 2 years ago
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆183Jun 17, 2023Updated 3 years ago
- The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics☆205Sep 18, 2024Updated 2 years ago
- OpenSTL: A Comprehensive Benchmark of Spatio-Temporal Predictive Learning☆1,149Mar 1, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The official implementation of the CVPR'2022 paper Hyperspherical Consistency Regularization.☆29Jun 22, 2022Updated 4 years ago
- The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.☆26Feb 21, 2023Updated 3 years ago
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Jun 25, 2023Updated 3 years ago
- The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Mo…☆11Jun 25, 2023Updated 3 years ago
- ☆10Feb 22, 2023Updated 3 years ago
- ☆11Sep 27, 2023Updated 2 years ago
- The official implementation of the ICML'24 paper "A Graph is Worth K Words: Euclideanizing Graph using Pure Transformer".☆49Mar 19, 2025Updated last year
- some methods about automated thermography defects detection☆21Nov 16, 2023Updated 2 years ago
- ☆40Dec 16, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆79Apr 22, 2025Updated last year
- ☆30Feb 20, 2024Updated 2 years ago
- ☆28Jul 21, 2026Updated last month
- The official implementation of the ECCV'24 paper MC-CoT: Boosting the Power of Small Multimodal Reasoning Models to Match Larger Models w…☆26May 19, 2024Updated 2 years ago
- Code for TNNLS paper "Beyond Homophily and Homogeneity Assumption: Relation-based Frequency Adaptive Graph Neural Networks"☆14Feb 27, 2024Updated 2 years ago
- Materials for "RNA secondary structure prediction with Convolutional Neural Networks" published in BMC Bioinformatics.☆14May 3, 2023Updated 3 years ago
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆18Jun 10, 2022Updated 4 years ago
- ☆14May 25, 2022Updated 4 years ago
- RNAView identifies base pairs that are formed in nucleic acid structures and classifies them according to the system of Leontis and Westh…☆21Jul 11, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code repository of "Deep generative design of RNA family sequences"☆44Apr 8, 2026Updated 5 months ago
- The open source code for ICDM2022 paper "Unifying Graph Contrastive Learning with Flexible Contextual Scopes"☆21Oct 3, 2022Updated 3 years ago
- A full-featured bioinformatics software collection for the comprehensive analysis of aptamers in HT-SELEX experiments.☆30Apr 14, 2023Updated 3 years ago
- ☆12Nov 16, 2023Updated 2 years ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 3 years ago
- VQ-GAN for Various Data Modality based on Taming Transformers for High-Resolution Image Synthesis☆29Apr 15, 2023Updated 3 years ago
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆12Dec 28, 2023Updated 2 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆11Oct 7, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆10Mar 23, 2024Updated 2 years ago
- Parallel solution for local RNA secondary structure analysis☆12Feb 14, 2023Updated 3 years ago
- Source code of EMNLP 2022 Findings paper "SparseAdapter: An Easy Approach for Improving the Parameter-Efficiency of Adapters"☆23Aug 22, 2026Updated 3 weeks ago
- [ICML 2024] VQDNA: Unleashing the Power of Vector Quantization for Multi-Species Genomic Sequence Modeling☆10Sep 22, 2024Updated last year
- Nature Methods: RNA foundation model (together with RhoFold)☆388May 27, 2025Updated last year
- Secondary structure prediction of long non-coding RNA: review and experimental comparison of existing approaches, L.A. Bugnon, A.A. Edera…☆21Mar 17, 2024Updated 2 years ago
- A rust wrapper for the spoa C++ partial order alignment library☆10Jun 11, 2025Updated last year