zangzelin / code_MustLinks
☆31Updated last year
Alternatives and similar repositories for code_Must
Users that are interested in code_Must are comparing it to the libraries listed below
Sorting:
- ☆11Updated 2 years ago
- [ICML 2024] VQDNA: Unleashing the Power of Vector Quantization for Multi-Species Genomic Sequence Modeling☆10Updated last year
- [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"☆30Updated 4 months ago
- The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-base…☆51Updated last year
- ☆26Updated 3 months ago
- The official implementation of the ICML'24 paper "A Graph is Worth K Words: Euclideanizing Graph using Pure Transformer".☆46Updated 7 months ago
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆53Updated last year
- [ICLR 2024] VQGraph: Rethinking Graph Representation Space for Bridging GNNs and MLPs☆102Updated last year
- Code for TNNLS paper "Homophily-Enhanced Self-supervision for Graph Structure Learning: Insights and Directions"☆15Updated last year
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆98Updated 2 years ago
- [IJCAI 2023] Graph Propagation Transformer for Graph Representation Learning☆50Updated 2 years ago
- Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through M…☆227Updated last week
- Code for ICML 2023 paper "Quantifying the Knowledge in GNNs for Reliable Distillation into MLPs"☆22Updated last month
- BioKGBench: A Knowledge Graph Checking Benchmark of AI Agent for Biomedical Science☆22Updated last year
- ☆12Updated 2 years ago
- ☆92Updated 2 years ago
- ☆31Updated last year
- A Comprehensive Benchmark of Imbalanced Graph Learning (Accepted by ICLR 2025 Spotlight)☆11Updated 6 months ago
- This repository is the official implementation of "Hyperbolic Geometric Latent Diffusion Model for Graph Generation (HypDiff)" accepted b…☆31Updated last year
- Implementation of ICML'24 Paper "Less is More: on the Over-Globalizing Problem in Graph Transformers"☆46Updated last year
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆44Updated last year
- [NeurIPS 2023] Does Invariant Graph Learning via Environment Augmentation Learn Invariance?☆22Updated last year
- GraphACL: Simple and Asymmetric Graph Contrastive Learning (NeurIPS 2023)☆33Updated last year
- Official implementation of MARIO: Model Agnostic Recipe for Improving OOD Generalization of Graph Contrastive Learning☆18Updated last year
- [COLM'24] We propose Protein Chain of Thought (ProCoT), which replicates the biological mechanism of signaling pathways as language promp…☆69Updated 7 months ago
- GraphMAE2: A Decoding-Enhanced Masked Self-Supervised Graph Learner in WWW'23☆170Updated 2 years ago
- ICLR'24 | BioBridge: Bridging Biomedical Foundation Models via Knowledge Graphs☆76Updated last year
- Must-read papers on AI for Biology☆21Updated 2 years ago
- Code for ICLR'24 Paper "Decoupling Weighing and Selecting for Integrating Multiple Graph Pre-training Tasks"☆10Updated last year
- This is an official implementation for "GRIT: Graph Inductive Biases in Transformers without Message Passing".☆128Updated 2 months ago