Alternatives and similar repositories for DrugGPT

Users that are interested in DrugGPT are comparing it to the libraries listed below

• zangzelin / code_Must
  ☆31Updated last year
• yangnianzu0515 / MoleOOD
  Official implementation for the paper "Learning Substructure Invariance for Out-of-Distribution Molecular Representations" (NeurIPS 2022)…
  ☆61Updated 2 years ago
• junxia97 / Mole-BERT
  [ICLR 2023] "Mole-BERT: Rethinking Pre-training Graph Neural Networks for Molecules"
  ☆121Updated 2 years ago
• A4Bio / RDesign
  The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-base…
  ☆49Updated 10 months ago
• syr-cn / SimSGT
  [NeurIPS 2023] "Rethinking Tokenizer and Decoder in Masked Graph Modeling for Molecules"
  ☆37Updated last year
• DeepGraphLearning / ProtST
  [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts
  ☆98Updated last year
• Lupin1998 / VQDNA
  [ICML 2024] VQDNA: Unleashing the Power of Vector Quantization for Multi-Species Genomic Sequence Modeling
  ☆10Updated 9 months ago
• chengtan9907 / Global-context-aware-generative-protein-design
  The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.
  ☆26Updated 2 years ago
• A4Bio / PiFold
  The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.
  ☆178Updated 2 years ago
• GRAPH-0 / CDGS
  Conditional Diffusion Based on Discrete Graph Structures for Molecular Graph Generation
  ☆33Updated 2 years ago
• A4Bio / ProteinInvBench
  The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics
  ☆187Updated 10 months ago
• FanmengWang / PolyConf
  [ICML2025] The official implementation of "PolyConf: Unlocking Polymer Conformation Generation through Hierarchical Generative Models"
  ☆20Updated last month
• ddz16 / MoMu
  The PyTorch implementation of MoMu, described in "Natural Language-informed Modeling of Molecule Graphs".
  ☆28Updated 2 years ago
• SDS-Lab / QW_Loss
  A Quasi-Wasserstein Loss for Learning Graph Neural Networks (QW loss)
  ☆10Updated last year
• LirongWu / Prompt-DDG
  Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…
  ☆41Updated 9 months ago
• Rich-XGK / GTMGC
  Implementation of GTMGC: Using Graph Transformer to Predict Molecule’s Ground-State Conformation (ICLR2024 Spotlight).
  ☆17Updated last year
• zhao-ht / GIMLET
  The code for GIMLET: A Unified Graph-Text Model for Instruction-Based Molecule Zero-Shot Learning
  ☆62Updated last year
• BingSu12 / MoMu
  ☆24Updated 2 years ago
• IDEA-XL / SubgDiff
  The official implementation of NeurIPS2024 paper "SubgDiff: A Subgraph Diffusion Model to Improve Molecular Representation Learning."
  ☆11Updated last month
• smiles724 / Awesome-Diffusion-Models-for-Science
  ☆26Updated 2 years ago
• lvkd84 / GraphFP
  Implementation of Fragment-based Pretraining and Finetuning on Molecular Graphs (NeurIPS 2023)
  ☆20Updated last year
• pengsl-lab / MSSL
  ☆12Updated 2 years ago
• HICAI-ZJU / iMoLD
  Official implementation for Learning Invariant Molecular Representation in Latent Discrete Space (NeurIPS 2023)
  ☆21Updated last year
• LUOyk1999 / HDSE
  [NeurIPS 2024] Implementation of "Enhancing Graph Transformers with Hierarchical Distance Structural Encoding"
  ☆15Updated 2 months ago
• ChnQ / LLM4Mol
  Code implementation for paper "Can Large Language Models Empower Molecular Property Prediction?"
  ☆39Updated 2 years ago
• bozhenhhu / A-Review-of-pLMs-and-Methods-for-Protein-Structure-Prediction
  ☆42Updated 2 years ago
• DeepGraphLearning / PEER_Benchmark
  PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)
  ☆92Updated 2 years ago
• ykiiiiii / GraDe_IF
  Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)
  ☆66Updated last year
• IDEA-XL / InstructMol
  InstructMol: Multi-Modal Integration for Building a Versatile and Reliable Molecular Assistant in Drug Discovery (COLING 2025)
  ☆47Updated 7 months ago
• tencent-ailab / DrugOOD
  OOD Dataset Curator and Benchmark for AI-aided Drug Discovery
  ☆161Updated 2 years ago