Materials for "RNA secondary structure prediction with Convolutional Neural Networks" published in BMC Bioinformatics.
☆14May 3, 2023Updated 2 years ago
Alternatives and similar repositories for RNA-secondary-structure-prediction-using-CNN
Users that are interested in RNA-secondary-structure-prediction-using-CNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SSR: A Unifed Framework for Prediction in Secondary Structure of RNA. 整合了LinearFold, E2Efold, MXfold2算法,包含数据集,欢迎一键使用。☆10Dec 31, 2021Updated 4 years ago
- pytorch implementation for "RNA Secondary Structure Prediction By Learning Unrolled Algorithms"☆122Apr 7, 2024Updated 2 years ago
- Secondary structure prediction of long non-coding RNA: review and experimental comparison of existing approaches, L.A. Bugnon, A.A. Edera…☆20Mar 17, 2024Updated 2 years ago
- MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration☆163Mar 22, 2026Updated 3 weeks ago
- Integrative Python library for RNA Secondary Structure Analysis☆20Mar 26, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆79Apr 22, 2025Updated 11 months ago
- RNA Multiple Sequence Alignment☆51Jul 20, 2023Updated 2 years ago
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆107May 23, 2025Updated 10 months ago
- ViennaRNA Package consists of a C code library for the prediction and comparison of RNA secondary structures☆15May 20, 2022Updated 3 years ago
- ☆12Feb 13, 2019Updated 7 years ago
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆18Jun 10, 2022Updated 3 years ago
- MCTS-RNA is a computational tool for solving RNA inverse folding problem with controlling the GC-content of the RNA sequence very precise…☆13Apr 3, 2017Updated 9 years ago
- Neural Machine Translation project for NLP Fall 2016☆10Dec 20, 2016Updated 9 years ago
- PyTorch Implementation of Reptile☆22Jan 5, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- GCNfold: A novel lightweight model with valid extractors for RNA secondary structure prediction☆14Jul 23, 2023Updated 2 years ago
- the codes for paper "IIFDTI: predicting drug target interaction through interactive and independent features based on attention mechanism…☆11Apr 7, 2022Updated 4 years ago
- ☆12Feb 6, 2026Updated 2 months ago
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆12Jan 15, 2021Updated 5 years ago
- 命例☆10Sep 27, 2018Updated 7 years ago
- Draw RNA secondary structures in python.☆52Jun 24, 2025Updated 9 months ago
- ☆16Sep 8, 2021Updated 4 years ago
- RNA Structural Covariation Above Phylogenetic Expectation☆19Dec 12, 2025Updated 4 months ago
- PyTorch implementation of OpenAI's REPTILE Algorithm☆26May 8, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Tejaas - a tool for discovering trans-eQTLs☆11Oct 14, 2022Updated 3 years ago
- ☆13Jun 5, 2024Updated last year
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆51Nov 23, 2023Updated 2 years ago
- Code to go along with a manuscript: Bunis, et. al., Cell Reports, 2021.☆12May 3, 2023Updated 2 years ago
- An extensible toolkit for DevOps and NoOps☆17Mar 9, 2026Updated last month
- 智能组卷系统☆16Jun 21, 2022Updated 3 years ago
- A fast and accurate RNA secondary structure, end-to-end approach prediction method.☆12Jan 2, 2025Updated last year
- Centroid RNA package☆20Oct 12, 2020Updated 5 years ago
- Implementation of Stochastic Depth Networks in Keras☆13Sep 10, 2016Updated 9 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- 抓取网易云音乐歌手歌词☆15Jan 18, 2018Updated 8 years ago
- An ML research codebase built with friends :)☆25Aug 25, 2024Updated last year
- ☆11Sep 22, 2021Updated 4 years ago
- Manipulate KEGG networks as NetworkX objects in in Python☆10Jan 21, 2022Updated 4 years ago
- ☆22Jun 14, 2025Updated 10 months ago
- ☆13Apr 9, 2026Updated last week
- structRFM: A fully open structure-guided RNA foundation model for robust structural and functional inference☆33Jan 25, 2026Updated 2 months ago