Materials for "RNA secondary structure prediction with Convolutional Neural Networks" published in BMC Bioinformatics.
☆14May 3, 2023Updated 3 years ago
Alternatives and similar repositories for RNA-secondary-structure-prediction-using-CNN
Users that are interested in RNA-secondary-structure-prediction-using-CNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SSR: A Unifed Framework for Prediction in Secondary Structure of RNA. 整合了LinearFold, E2Efold, MXfold2算法,包含数据集,欢迎一键使用。☆10Dec 31, 2021Updated 4 years ago
- pytorch implementation for "RNA Secondary Structure Prediction By Learning Unrolled Algorithms"☆123Apr 7, 2024Updated 2 years ago
- Secondary structure prediction of long non-coding RNA: review and experimental comparison of existing approaches, L.A. Bugnon, A.A. Edera…☆22Mar 17, 2024Updated 2 years ago
- MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration☆163Mar 22, 2026Updated 6 months ago
- Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learni…☆37Apr 3, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Integrative Python library for RNA Secondary Structure Analysis☆20Mar 26, 2025Updated last year
- ☆79Apr 22, 2025Updated last year
- RNA Multiple Sequence Alignment☆53Jul 20, 2023Updated 3 years ago
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆106May 23, 2025Updated last year
- ViennaRNA Package consists of a C code library for the prediction and comparison of RNA secondary structures☆15May 20, 2022Updated 4 years ago
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆18Jun 10, 2022Updated 4 years ago
- GCNfold: A novel lightweight model with valid extractors for RNA secondary structure prediction☆13Jul 23, 2023Updated 3 years ago
- MCTS-RNA is a computational tool for solving RNA inverse folding problem with controlling the GC-content of the RNA sequence very precise…☆13Apr 3, 2017Updated 9 years ago
- the codes for paper "IIFDTI: predicting drug target interaction through interactive and independent features based on attention mechanism…☆11Apr 7, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- 命例☆10Sep 27, 2018Updated 8 years ago
- 分布式题库管理系统.☆18Mar 22, 2019Updated 7 years ago
- 16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.☆12Jan 15, 2021Updated 5 years ago
- Draw RNA secondary structures in python.☆54Jun 24, 2025Updated last year
- ☆16Sep 8, 2021Updated 5 years ago
- A fast and accurate RNA secondary structure, end-to-end approach prediction method.☆13Jan 2, 2025Updated last year
- PyTorch implementation of OpenAI's REPTILE Algorithm☆26May 8, 2018Updated 8 years ago
- 智能组卷系统☆18Aug 9, 2026Updated last month
- An extensible toolkit for DevOps and NoOps☆17Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Rewrite of git-credential-bw-shell in Typescript.☆12Apr 16, 2026Updated 5 months ago
- Code to go along with a manuscript: Bunis, et. al., Cell Reports, 2021.☆12May 3, 2023Updated 3 years ago
- Manipulate KEGG networks as NetworkX objects in in Python☆10Jan 21, 2022Updated 4 years ago
- a simple R data package for curated cancer pathway-specific gene lists☆13Mar 31, 2020Updated 6 years ago
- Simple scVI implementation☆13Aug 31, 2026Updated 3 weeks ago
- MOMA: A Multi-task Attention Learning Algorithm for Multi-omics Data Interpretation and Classification☆19Apr 10, 2023Updated 3 years ago
- ☆14Jun 5, 2024Updated 2 years ago
- data and code for paper "CCGIR: Information Retrieval-based Code Comment Generation Method for Smart Contracts", which accepted in KBS. 智…☆17Apr 24, 2022Updated 4 years ago
- Repository for the UTN BA Data Science Course 2020☆15Jun 28, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Implementation of Stochastic Depth Networks in Keras☆13Sep 10, 2016Updated 10 years ago
- ☆10Feb 3, 2020Updated 6 years ago
- ☆11Sep 22, 2021Updated 5 years ago
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Mar 1, 2023Updated 3 years ago
- Supervised Dimensionality Reduction and Classification with Convolutional Autoencoders☆11Nov 4, 2022Updated 3 years ago
- Tumor-Infiltrating CD8 Lymphocytes states prediction☆15Feb 7, 2024Updated 2 years ago
- scripts for parsing PDB, fasta, and GO☆16Oct 20, 2021Updated 4 years ago