Alternatives and similar repositories for MIMIC-IV-ICD-data-processing

Users that are interested in MIMIC-IV-ICD-data-processing are comparing it to the libraries listed below

• bvanaken / clinical-outcome-prediction
  Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
  ☆95Updated last year
• JoakimEdin / medical-coding-reproducibility
  ☆89Updated last year
• nwams / ClinicalBERT-Deep-Learning--Predicting-Hospital-Readmission-Using-Transformer
  Blog post on Medium
  ☆49Updated 3 years ago
• ZhiGroup / Med-BERT
  Med-BERT, contextualized embedding model for structured EHR data
  ☆307Updated last year
• sajaddarabi / TAPER-EHR
  Patient Code & Text Representation Learning
  ☆20Updated 2 years ago
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆96Updated 4 months ago
• emnlp-mimic / mimic
  ☆22Updated 3 years ago
• acadTags / Awesome-medical-coding-NLP
  A collection of papers on automated medical coding from free-texts
  ☆148Updated 10 months ago
• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆116Updated 2 years ago
• luoyuanlab / Clinical-Longformer
  ☆63Updated 2 years ago
• 3mcloud / MDACE
  The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…
  ☆29Updated 2 years ago
• ZhiGroup / pytorch_ehr
  source codes based on PyTorch to analyze EHR
  ☆147Updated last year
• whaleloops / KEPT
  auto icd coding with prompt
  ☆49Updated last year
• ji-youn-kim / EHRNoteQA
  [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"
  ☆34Updated 9 months ago
• simonlevine / clinical-longformer
  ☆38Updated 3 years ago
• rvandewater / YAIB
  🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datase…
  ☆80Updated last week
• starmpcc / Asclepius
  Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"
  ☆110Updated last year
• hoon9405 / UniHPF
  UniHPF : Universal Healthcare Predictive Framework with Zero Domain Knowledge
  ☆13Updated last year
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆48Updated last year
• MiuLab / PLM-ICD
  PLM-ICD: Automatic ICD Coding with Pretrained Language Models
  ☆73Updated last year
• nliulab / mimic4ed-benchmark
  Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.
  ☆86Updated 3 years ago
• yhydhx / ChatGPT-API
  Implements ChatGPT API via request package.
  ☆46Updated 2 years ago
• 3778 / icd-prediction-mimic
  Predicting ICD Codes from Clinical Notes
  ☆63Updated 5 years ago
• asappresearch / clip
  ☆29Updated 4 years ago
• GanjinZero / ICD-MSMN
  Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]
  ☆53Updated 3 years ago
• weimin17 / Multimodal_Transformer
  A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction
  ☆36Updated 3 years ago
• MIT-LCP / bloatectomy
  A python package for removing duplicate text in clinical notes or other documents
  ☆38Updated 5 years ago
• som-shahlab / ehrshot-benchmark
  A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)
  ☆196Updated 4 months ago
• Jwoo5 / integrated-ehr-pipeline
  ☆14Updated last year
• som-shahlab / femr
  FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…
  ☆156Updated 2 weeks ago