Alternatives and similar repositories for snpr

Users that are interested in snpr are comparing it to the libraries listed below

• arrogantrobot / 23andme2vcf
  convert your 23andme raw file to VCF | DEPRECATED, please see https://github.com/plantimals/2vcf
  ☆97Updated 5 years ago
• 23andMe / seqseek
  Easy access to human reference genome sequences
  ☆56Updated 2 years ago
• refinery-platform / refinery-platform
  The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …
  ☆104Updated 2 years ago
• 23andMe / yhaplo
  Identifying Y-chromosome haplogroups in arbitrarily large samples of sequenced or genotyped men
  ☆110Updated 3 months ago
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆98Updated 7 years ago
• lucapinello / CRISPResso
  Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data
  ☆135Updated 6 years ago
• phageParser / phageParser
  A project to extract CRISPR information from open genetic data.
  ☆111Updated 5 years ago
• dasmoth / dalliance
  Interactive web-based genome browser.
  ☆227Updated 5 years ago
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆61Updated 6 years ago
• ncbi / ngs
  NGS Language Bindings
  ☆119Updated last year
• lh3 / bioawk
  BWK awk modified for biological data
  ☆617Updated 2 years ago
• ssadedin / bpipe
  Bpipe - a tool for running and managing bioinformatics pipelines
  ☆236Updated 3 months ago
• opencb / cellbase
  High-Performance NoSQL database and RESTful web services to access to most relevant biological data. Found a bug or have an idea for a ne…
  ☆92Updated this week
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆85Updated 3 years ago
• MaayanLab / biojupies
  Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.
  ☆114Updated 6 months ago
• ga4gh / mme-apis
  Documentation for the MatchmakerExchange APIs
  ☆33Updated last year
• bionode / bionode-ncbi
  Node.js module for working with the NCBI API (aka e-utils).
  ☆66Updated 5 years ago
• verilylifesciences / variant-qc
  Quality control methods for human genomic variants.
  ☆62Updated 2 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated 8 months ago
• biothings / myvariant.info
  MyVariant.info: A BioThings API for human variant annotations
  ☆95Updated last month
• blab / nextflu
  Real-time tracking of influenza evolution
  ☆88Updated last year
• arq5x / gemini
  a lightweight db framework for exploring genetic variation.
  ☆320Updated 5 years ago
• gedankenstuecke / genotyping_23andme
  My raw genotyping data from 23andme
  ☆35Updated 6 years ago
• superbobry / snpy
  A wrapper-library for reading openSNP data
  ☆50Updated 7 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆97Updated 2 years ago
• plantimals / 2vcf
  convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations
  ☆58Updated 5 years ago
• konradjk / loftee
  ☆177Updated last year
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆56Updated 2 weeks ago
• bgruening / docker-galaxy
  Docker Images tracking the stable Galaxy releases.
  ☆234Updated 2 months ago
• mitre / fusera
  A FUSE interface to the NCBI Sequence Read Archive (SRA)
  ☆29Updated 5 years ago