wurst-theke / ButchRLinks
☆13Updated 2 years ago
Alternatives and similar repositories for ButchR
Users that are interested in ButchR are comparing it to the libraries listed below
Sorting:
- processes GoT amplicon data and generates a table of metrics☆31Updated 3 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- ☆62Updated 4 months ago
- Exon-Intron Split Analysis (EISA) in R☆16Updated 3 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- Bead-based single-cell atac processing☆33Updated 3 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆89Updated 4 months ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆45Updated 8 months ago
- ☆23Updated 6 months ago
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆23Updated 2 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- R package for Flexible dot plots☆29Updated 3 years ago
- ☆10Updated 5 years ago
- Inferring gene co-expression networks from single cell gene expression data☆26Updated 3 years ago
- Explore the cancer relevance of your gene list☆51Updated 5 months ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Transcript quantification import with automatic metadata detection☆68Updated last month
- A single cell sequencing read simulator.☆33Updated 9 months ago
- Identify and correct invalid gene symbols☆58Updated 8 months ago
- An R for fast and flexible DNA methylation analysis☆32Updated last month
- Dimensionality reduction and batch integration methods for single cell data☆16Updated 2 years ago
- 🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 �…☆44Updated 5 months ago
- Create QC and summary reports for Alevin output☆31Updated 3 weeks ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated 2 weeks ago
- Tools for assessing clustering robustness☆25Updated last week
- Lightweight Iterative Gene set Enrichment in R☆57Updated 10 months ago
- R/Bioconductor package for working with 10x scATACseq data☆40Updated last year
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆16Updated 3 months ago