Alternatives and similar repositories for GTEx_edQTL:

Users that are interested in GTEx_edQTL are comparing it to the libraries listed below

• RitchieLab / GWAS-QC
  Quality control steps for GWAS
  ☆18Updated last year
• swvanderlaan / MetaGWASToolKit
  A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies
  ☆16Updated last month
• jinghuazhao / INF
  SCALLOP-INF analysis
  ☆20Updated 5 months ago
• hakyimlab / gtex-gwas-analysis
  ☆21Updated 3 years ago
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆20Updated 7 years ago
• lcpilling / gwasRtools
  R package for processing of GWAS output
  ☆13Updated 7 months ago
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆22Updated 3 years ago
• hakyimlab / PredictDBPipeline
  ☆15Updated 4 years ago
• getian107 / SuSiEx
  Cross-population fine-mapping
  ☆33Updated 2 months ago
• bhattacharya-a-bt / isotwas
  ☆19Updated last month
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆15Updated 3 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 2 years ago
• hakyimlab / PredictDB_Pipeline_GTEx_v7
  PredictDB Pipeline for GTEx v7 data
  ☆17Updated 2 years ago
• wuyangf7 / OPERA
  This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…
  ☆33Updated 4 months ago
• FinucaneLab / fine-mapping-inf
  Fine-mapping with infinitesimal effects
  ☆14Updated 11 months ago
• psoerensen / qgg
  Statistical tools for Quantitative Genetic Analyses
  ☆36Updated last month
• EMO-Consortium / GeneticCorrelation
  ☆11Updated last year
• opain / Calculating-FUSION-TWAS-weights-pipeline
  This is a pipeline for calculating weights for TWAS
  ☆30Updated 2 years ago
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated last year
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆31Updated 4 years ago
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆22Updated 3 months ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆26Updated 9 months ago
• juliedwhite / miamiplot
  An R package for creating ggplot2 based miami plots.
  ☆16Updated 11 months ago
• jinghuazhao / FM-pipeline
  A Fine-Mapping pipeline
  ☆19Updated 5 years ago
• myles-lewis / locuszoomr
  A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.
  ☆40Updated this week
• zhilizheng / qsubshcom
  qsub command for serveral cluster engine
  ☆13Updated last month
• borangao / MESuSiE
  ☆17Updated 2 months ago
• cumc / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆20Updated this week
• ckhunsr1 / PUMICE
  PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics
  ☆12Updated last year
• yuanzhongshang / GIFT
  ☆18Updated 3 months ago