Alternatives and similar repositories for GP2-Beginner-Bioinformatics-for-PD-Genetics

Users that are interested in GP2-Beginner-Bioinformatics-for-PD-Genetics are comparing it to the libraries listed below

• GP2code / GP2-Multiancestry-metaGWAS
  ☆10Updated 2 years ago
• vargasliqin / GTEx_edQTL
  ☆9Updated 2 years ago
• Bio-OS / bio-mate
  ☆10Updated last year
• lulab / shared_scripts
  shared scripts in Lu Lab @ Tsinghua University
  ☆13Updated 6 years ago
• pandora414 / lncRNA
  lncRNA分析流程
  ☆8Updated 6 years ago
• zhilizheng / qsubshcom
  qsub command for serveral cluster engine
  ☆14Updated 6 months ago
• raymondkiu / R-scripts-graphing-statistics
  My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq
  ☆12Updated 2 years ago
• derekmichaelwright / gwaspr
  An R package for plotting GWAS results from the GAPIT package
  ☆12Updated 2 weeks ago
• Shicheng-Guo / HowtoBook
  Readme
  ☆10Updated 5 years ago
• jpuritz / BIO_594_2023
  ☆8Updated 2 years ago
• zhaoshuoxp / lncRNA
  De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk
  ☆10Updated last year
• eacooper400 / GWAS_Pipelines
  Instructions and helpful R code for Running GEMMA and GAPIT
  ☆12Updated 7 years ago
• roman-tremmel / ggfastman
  Fast manhattenplots using ggplot2
  ☆9Updated last year
• Xinglab / Myc-regulated_AS_PrCa_paper
  Scripts for plotting figures and running analysis throughout the manuscript
  ☆11Updated 3 years ago
• DelinLi / TWAS
  Example for TWAS
  ☆11Updated 3 years ago
• Rowena-h / FusariumLifestyles
  Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣
  ☆11Updated 2 years ago
• FinucaneLab / fine-mapping-inf
  Fine-mapping with infinitesimal effects
  ☆16Updated last month
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆20Updated 7 years ago
• naumenko-sa / bioscripts
  a bucket of bioinformatics scripts
  ☆13Updated 3 weeks ago
• liusihan / population-compare-pipeline
  Analysis pipelines for QTL discovery and GWAS signals interpretation
  ☆9Updated 10 months ago
• dtrain16 / NGS-scripts
  Scripts for next generation sequencing analyses
  ☆14Updated 3 weeks ago
• ipdgc / Manhattan-Plotter
  This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3
  ☆12Updated 6 years ago
• artempronozin95 / ICAnnoLncRNA-identification-classification-and-annotation-of-LncRNA
  ☆9Updated 7 months ago
• shuliliu / cattleGTEx
  The cattle Genotype-Tissue Expression atlas v1
  ☆26Updated 2 years ago
• Nealelab / whole_genome_analysis_pipeline
  ☆19Updated 2 years ago
• yukaiquan / biotools
  I often use some of the self-written programs.
  ☆16Updated 3 months ago
• bvoightlab / ColocQuiaL
  Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
  ☆18Updated 2 years ago
• mortazavilab / cerberus
  ☆19Updated 11 months ago
• sterding / BRAINcode
  Script and pipeline for BRAINcode project
  ☆17Updated 4 years ago
• lcpilling / gwasRtools
  R package for processing of GWAS output
  ☆14Updated last year