udel-biotm-lab / BERT-RELinks
☆9Updated 3 years ago
Alternatives and similar repositories for BERT-RE
Users that are interested in BERT-RE are comparing it to the libraries listed below
Sorting:
- AIONER☆55Updated 10 months ago
- ☆32Updated last year
- PhenoTagger☆56Updated last year
- Data structures and code to read/write BioC XML and Json.☆32Updated last year
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆28Updated 3 years ago
- ☆24Updated 4 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 3 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- Retrieve and process PubTator annotations☆44Updated last year
- ☆22Updated 2 years ago
- Repository for student projects within biomedical text mining from Lund University☆54Updated 2 years ago
- Biomedical Entity Linking Benchmark☆13Updated 5 months ago
- ☆26Updated last year
- A framework for keeping biomedical text mining result up-to-date☆42Updated 4 years ago
- ☆41Updated 5 years ago
- Bioformer: an efficient BERT model for biomedical text mining☆55Updated 2 years ago
- Python library for work with BioCreative files☆13Updated 7 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Updated 5 years ago
- ☆20Updated last year
- ☆17Updated 2 years ago
- ☆25Updated last year
- ☆55Updated 4 years ago
- Biomedical wordlists (of drugs, genes, etc) for several text mining projects☆18Updated 2 years ago
- Grounding of biomedical named entities with contextual disambiguation☆44Updated 3 weeks ago
- A combined deep learning tool for automated recognition of human phenotype ontology☆24Updated 2 years ago
- CoCoScore: context-aware co-occurrence scores for text mining applications☆19Updated 6 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago