ncbi / BioRED
☆22Updated last year
Alternatives and similar repositories for BioRED:
Users that are interested in BioRED are comparing it to the libraries listed below
- ☆31Updated last year
- AIONER☆49Updated 7 months ago
- Biomedical Term Annotator☆9Updated last week
- Bio relation extraction labeled dataset☆43Updated 2 years ago
- ☆20Updated last year
- a module to calculate the MeSH similarity☆24Updated 3 years ago
- ☆32Updated 3 weeks ago
- Data structures and code to read/write BioC XML and Json.☆31Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆42Updated 4 months ago
- Biomedical Entity Linking Benchmark☆11Updated 2 months ago
- a module to calculate the MeSH similarity☆26Updated 3 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆182Updated 11 months ago
- Retrieve and process PubTator annotations☆44Updated last year
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆28Updated 3 years ago
- ☆55Updated 4 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- Bioformer: an efficient BERT model for biomedical text mining☆54Updated 2 years ago
- Python library for working with BioC files☆13Updated 6 years ago
- ☆65Updated 2 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- Python library for work with BioCreative files☆13Updated 6 years ago
- Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…☆109Updated 3 years ago
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆28Updated 3 years ago
- ☆24Updated 4 years ago
- Repository for student projects within biomedical text mining from Lund University☆52Updated last year
- ☆50Updated 2 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- PhenoTagger☆55Updated last year
- a customzable pipeline for information extraction☆15Updated this week
- A full-text article retrieval pipeline for biomedical literature.☆20Updated 3 months ago