ncbi / BioRED
☆24Updated last year
Alternatives and similar repositories for BioRED
Users that are interested in BioRED are comparing it to the libraries listed below
Sorting:
- ☆32Updated last year
- AIONER☆55Updated 9 months ago
- ☆34Updated 3 months ago
- Biomedical Term Annotator☆9Updated 2 months ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- Biomedical Entity Linking Benchmark☆13Updated 5 months ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 3 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- Repository for student projects within biomedical text mining from Lund University☆54Updated last year
- Data structures and code to read/write BioC XML and Json.☆32Updated last year
- ☆25Updated last year
- ☆24Updated 4 years ago
- Bioformer: an efficient BERT model for biomedical text mining☆54Updated 2 years ago
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆28Updated 3 years ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆187Updated last year
- Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…☆115Updated 3 years ago
- PhenoTagger☆56Updated last year
- A Silver Standard Corpus of Human Phenotype-Gene Relations☆13Updated 2 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆44Updated last week
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- A full-text article retrieval pipeline for biomedical literature.☆21Updated 2 months ago
- ☆55Updated 4 years ago
- A combined deep learning tool for automated recognition of human phenotype ontology☆24Updated 2 years ago
- ☆67Updated 2 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆188Updated 2 years ago
- Biomedical Relation Extraction with Knowledge Graph-based Recommendations☆8Updated last year
- Python library for working with BioC files☆13Updated 7 years ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆39Updated 2 weeks ago