ncbi / BioREDLinks
☆28Updated 2 years ago
Alternatives and similar repositories for BioRED
Users that are interested in BioRED are comparing it to the libraries listed below
Sorting:
- AIONER☆60Updated last year
- ☆32Updated last year
- ☆30Updated last year
- ☆38Updated 4 months ago
- Data structures and code to read/write BioC XML and Json.☆32Updated 2 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆195Updated last year
- Repository for student projects within biomedical text mining from Lund University☆55Updated 2 years ago
- a module to calculate the MeSH similarity☆26Updated 3 years ago
- PhenoTagger☆58Updated last year
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- ☆24Updated 4 years ago
- ☆70Updated 3 years ago
- Python library for working with BioC files☆13Updated 7 years ago
- ☆22Updated 2 years ago
- Biomedical Entity Linking Benchmark☆14Updated 9 months ago
- Grounding of biomedical named entities with contextual disambiguation☆45Updated last month
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆29Updated 3 years ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆48Updated last week
- a customzable pipeline for information extraction☆17Updated 4 months ago
- A full-text article retrieval pipeline for biomedical literature.☆21Updated 3 weeks ago
- Bioformer: an efficient BERT model for biomedical text mining☆55Updated 2 years ago
- ☆57Updated 4 years ago
- Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…☆121Updated 3 years ago
- A combined deep learning tool for automated recognition of human phenotype ontology☆26Updated 2 years ago
- A Python package to download full article PDFs from OA publications☆48Updated 8 months ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- ☆41Updated 5 years ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆51Updated 2 months ago