tothuhien / Rlsd2

Related projects ⓘ

Alternatives and complementary repositories for Rlsd2

• emvolz / treedater
  Scalable relaxed clock phylogenetic dating
  ☆24Updated 7 months ago
• emvolz-phylodynamics / treestructure
  ☆17Updated 6 months ago
• duchene / phylomad
  ☆19Updated 5 months ago
• mdkarcher / phylodyn
  ☆17Updated 3 years ago
• tothuhien / lsd-0.3beta
  ☆12Updated 5 years ago
• theosanderson / chronumental
  Estimating time trees from very large phylogenies
  ☆24Updated 4 months ago
• jsigao / prioritree
  ☆9Updated last year
• grubaughlab / DENV_pipeline
  ☆15Updated last month
• escamero / mirlyn
  ☆11Updated 3 months ago
• TBooker / PicMin
  ☆11Updated last year
• emvolz-phylodynamics / mlesky
  ☆10Updated 6 months ago
• phylogeography / SPREADv1
  Spatial Phylogenetic Reconstruction of Evolutionary Dynamics
  ☆20Updated 5 years ago
• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated 4 months ago
• statdivlab / paramedic
  Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations
  ☆14Updated 6 months ago
• larssnip / micropan
  R package for microbial pangenomics
  ☆21Updated 2 years ago
• gavinmdouglas / POMS
  Phylogenetic Organization of Metagenomic Signals (POMS)
  ☆19Updated last year
• thednainus / Bayesian_tutorial
  Tutorial on Bayesian phylogenetic analysis
  ☆45Updated 7 years ago
• danlwarren / RWTY
  R We There Yet?
  ☆30Updated 2 years ago
• gavinmdouglas / FuncDiv
  R package for computing alpha and beta contributional diversity metrics
  ☆10Updated last year
• nick-youngblut / traitar3
  From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)
  ☆22Updated 4 months ago
• SWittouck / tidyamplicons
  Functions to manipulate and visualize microbial community data
  ☆11Updated last year
• mrc-ide / skygrowth
  Phylodynamic inference
  ☆18Updated 4 years ago
• ggloor / ALDEx_bioc
  ALDEx_bioc is the working directory for updating bioconductor
  ☆27Updated 10 months ago
• tgvaughan / bacter
  Bacterial phylogenetics in BEAST 2.
  ☆17Updated last year
• alvinxhan / PhyCLIP
  Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)
  ☆17Updated 4 years ago
• broadinstitute / delphy
  Fast, scalable, accurate and accessible Bayesian phylogenetics
  ☆27Updated 2 weeks ago
• thh32 / Protologger
  Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights
  ☆12Updated last year
• laduplessis / skylinetools
  Utilities and distributions for (birth-death) skyline models.
  ☆10Updated 5 years ago
• xavierdidelot / TransPhylo
  Reconstruction of transmission trees using genomic data
  ☆60Updated last year
• FePhyFoFum / PyPHLAWD
  Python version of PHLAWD
  ☆21Updated 3 weeks ago