Proxy-auto-discovery for command-line applications
☆25Aug 8, 2020Updated 6 years ago
Alternatives and similar repositories for pac4cli
Users that are interested in pac4cli are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆29Sep 28, 2021Updated 4 years ago
- ISCompare, an opensource program to identify Differentially Located Insertion Sequences☆14Apr 30, 2026Updated 3 months ago
- Output FASTQ summary statistics in JSON format☆29Oct 30, 2022Updated 3 years ago
- 静态站点☆15Mar 8, 2021Updated 5 years ago
- ORF prediction using python☆10Aug 24, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- a Contig Alignment Tool for Pairwise Assembly Comparison☆12Dec 11, 2019Updated 6 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆40Mar 14, 2023Updated 3 years ago
- download isfinder database☆13Nov 9, 2018Updated 7 years ago
- visualising sequence similarity with Circos☆41Jul 1, 2019Updated 7 years ago
- A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the…☆17Mar 19, 2023Updated 3 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆21May 20, 2025Updated last year
- Calculate fastq reads and sequencing coverage☆15Oct 20, 2020Updated 5 years ago
- A new graphical interface for RAxML☆23Jul 20, 2026Updated 3 weeks ago
- Scotch pipeline for indel calling.☆10Nov 25, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- your friendly pangenome graph genotyper☆10Feb 6, 2023Updated 3 years ago
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- The final version 2 release of our software to detect core genes in eukaryotic genomes☆30Mar 31, 2015Updated 11 years ago
- Analyzes whole genome sequencing data for gene-editing verification☆13Jul 3, 2026Updated last month
- Phasing of dikaryotic fungal genome assemblies☆13Mar 1, 2023Updated 3 years ago
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆14Mar 16, 2026Updated 4 months ago
- Lint Nextflow pipelines in Python.☆11Jan 23, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A rust wrapper for the spoa C++ partial order alignment library☆10Jun 11, 2025Updated last year
- A flexible and fast sgRNA counter from FASTQ Files☆11Jun 17, 2026Updated last month
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 7 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- A simple script to run an alignment with nucmer and visualise its results.☆10Apr 17, 2023Updated 3 years ago
- ViromeScan allows the user to explore and taxonomically characterize the virome from metagenomic reads, efficiently denoising samples fro…☆13Feb 13, 2023Updated 3 years ago
- Rust coder/decoder for Nucleotide Archival Format (NAF) files.☆10Jan 31, 2025Updated last year
- Genotyping lots of samples with big pangenomes☆11Oct 30, 2025Updated 9 months ago
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- ☆14Mar 22, 2018Updated 8 years ago