tidytranscriptomics-workshops / bioc2022_tidytranscriptomics
Workshop About Tidy Transcriptomics for Single-cell RNA Sequencing Analyses
☆9Updated last year
Alternatives and similar repositories for bioc2022_tidytranscriptomics:
Users that are interested in bioc2022_tidytranscriptomics are comparing it to the libraries listed below
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 2 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Visualise correlation results and test significancies of these☆21Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated 10 months ago
- Representation and manipulation of genomic intervals☆44Updated 3 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- Identify and correct invalid gene symbols☆59Updated 3 months ago
- Clone of the Bioconductor repository for the basilisk package.☆27Updated last week
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- Differential expression and allelic analysis, nonparametric statistics☆28Updated last month
- Glimma R package☆50Updated 5 months ago
- ☆16Updated last year
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated last year
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 4 months ago
- Reactome Pathway Analysis☆40Updated 3 months ago
- Transcript quantification import with automatic metadata detection☆67Updated 3 weeks ago
- the manifesto, workshops and tutorials of the tidy transcriptomics☆12Updated 9 months ago
- Statistical power studies for multi-omics experiments.☆30Updated last month
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 3 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆44Updated 4 years ago
- Subtyping tool for multi-omic data☆13Updated 2 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆61Updated last month
- A snakemake pipeline for 10X genomics cellranger☆20Updated 2 months ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆19Updated last year
- This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…☆28Updated 9 months ago
- Clone of the Bioconductor repository for the DropletUtils package.☆56Updated 2 months ago
- Mixed-effect model to test differences in cell type proportions from single-cell data, in R☆99Updated this week
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆36Updated last year