Alternatives and similar repositories for zetadesign:

Users that are interested in zetadesign are comparing it to the libraries listed below

• ikalvet / heme_binder_design
  ☆9Updated last year
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated last month
• karma211225 / KarmaLoop
  Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop
  ☆11Updated 9 months ago
• bzho3923 / CPDiffusion
  ☆22Updated 5 months ago
• davidekim / parametric_barrels
  ☆12Updated last month
• Junjie-Zhu / IDPFold
  IDPFold test version
  ☆19Updated 6 months ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆31Updated 3 months ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆21Updated 5 years ago
• gitter-lab / metl-sim
  High-throughput framework for running molecular simulations for METL
  ☆16Updated last month
• EureKaZhu / DiffAffinity
  Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)
  ☆34Updated last year
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆31Updated 2 weeks ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆31Updated last year
• drhicks / Kejia_peptide_binders
  code for IDR binding paper 2025
  ☆16Updated last month
• jiaxianyan / DeltaDock
  ☆21Updated 5 months ago
• Gonglab-THU / GeoStab
  ☆30Updated 5 months ago
• matsagad / mres-project
  Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.
  ☆10Updated 3 months ago
• kad-ecoli / mmCIF2BioLiP
  BioLiP2 database curation and web interface
  ☆23Updated last month
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆25Updated last year
• anirudhvenk / antibody-dpo
  ☆17Updated 2 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆44Updated last year
• Ryan-Hu-Hu-Hu / GRACE
  GRACE: Generative Renaissance in Artificial Computational Enzyme Design
  ☆16Updated 2 months ago
• meneshail / TopoDiff
  Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"
  ☆14Updated last month
• microsoft / bioemu-benchmarks
  Benchmarking code accompanying the release of `bioemu`
  ☆18Updated last month
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆32Updated 4 months ago
• ComputArtCMCG / ProBID-NET
  ☆14Updated 5 months ago
• masoudk / AsiteDesign
  ☆13Updated last year
• dgattiwsu / MD_without_molecules
  Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks
  ☆11Updated 2 years ago
• microsoft / seq2symm
  Homomer symmetry prediction from protein sequence
  ☆20Updated 2 weeks ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆29Updated last month
• ohuelab / ColabDesign-cyclic-binder
  ☆31Updated last year