thierrygosselin / stackrLinks
stackr: an R package to run stacks software pipeline
☆29Updated 2 months ago
Alternatives and similar repositories for stackr
Users that are interested in stackr are comparing it to the libraries listed below
Sorting:
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆26Updated last week
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- Population assignment analysis using R☆17Updated 2 months ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- the hierfstat package☆25Updated 7 months ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆41Updated 9 months ago
- ☆13Updated 8 years ago
- A package for population structure inference from RAD-seq data☆31Updated 4 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated last week
- ☆30Updated 2 years ago
- UCE Bioinformatics Pipeline☆16Updated 7 months ago
- Fast and simple simulation-based population genetic inference in R☆27Updated 2 weeks ago
- ☆31Updated 3 years ago
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated last week
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆31Updated 3 months ago
- Population and Evolutionary Genetics Analysis System☆28Updated 3 months ago
- An R Package to build and simulate coalescent models☆20Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆59Updated 8 months ago
- ☆26Updated 4 years ago
- Phylogenetic penalized likelihood☆49Updated last month
- Repository for speciation genomics website☆25Updated 11 months ago
- Shiny apps for teaching Population Genetics☆65Updated 2 years ago
- Simple and flexible manipulation of genomic data.☆16Updated 2 months ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆150Updated last year
- Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…☆8Updated 5 years ago
- A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop☆15Updated 4 years ago
- Workflow to detect and phase hybrids in target capture data☆19Updated 2 years ago
- Estimating Effective Migration Surfaces☆103Updated last year
- Population genetic simulations in R 🌍☆59Updated last week
- Tutorials for bioinformatics and data analysis related to landscape genomics☆28Updated 6 years ago