imagej / imagej-matlabLinks
MATLAB integration with ImageJ data structures and runtime.
☆14Updated 4 months ago
Alternatives and similar repositories for imagej-matlab
Users that are interested in imagej-matlab are comparing it to the libraries listed below
Sorting:
- Matlab function to import ROIs from ImageJ☆27Updated 5 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated last month
- Image acquisition software for mesoSPIM light-sheet microscopes.☆42Updated 2 weeks ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Updated 3 years ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 9 months ago
- Things we use regularly☆29Updated 10 months ago
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆27Updated 5 years ago
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated last year
- Flow-Registration toolbox for 2P motion compensation☆24Updated 11 months ago
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆45Updated 4 months ago
- Binary releases of Vaa3D and related software components☆44Updated last year
- Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher☆23Updated 9 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆41Updated 8 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 2 months ago
- code of the registration and deconvolution project☆34Updated 4 years ago
- A package for processing diSPIM images with GPU implementation☆14Updated 3 years ago
- A fast multi-image tiff writer for Matlab☆18Updated last year
- The ImageJ framework for quantification of neuronal anatomy☆50Updated last week
- Zernike Optimized Localization Algorithm for 3D single molecule localizations☆19Updated 2 years ago
- Automatic Correction for sCMOS-related Noise☆17Updated 3 years ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated this week
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Updated 3 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 3 months ago
- MSSR Plugin☆13Updated 7 months ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Serial-section automated anatomy extension for ScanImage☆14Updated last week
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets☆13Updated 3 years ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆31Updated 2 months ago