imagej / imagej-matlab
MATLAB integration with ImageJ data structures and runtime.
☆14Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for imagej-matlab
- Matlab function to import ROIs from ImageJ☆26Updated 4 years ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆24Updated 2 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆68Updated 2 weeks ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆37Updated this week
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated last year
- Flow-Registration toolbox for 2P motion compensation☆21Updated 3 months ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆51Updated 4 years ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆27Updated last week
- Z-stack Depth Colorcode ImageJ FIJI plugin☆22Updated 3 years ago
- ☆21Updated 3 years ago
- Create 3D/4D animations using a natural language-based syntax☆58Updated last year
- The ImageJ framework for quantification of neuronal anatomy☆42Updated this week
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆37Updated 3 weeks ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆12Updated last week
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆16Updated 7 years ago
- Serial-section automated anatomy extension for ScanImage☆12Updated 2 months ago
- ImageJ convenience layer for N5☆15Updated 3 weeks ago
- Create movies from series of key-frames in napari.☆38Updated 3 years ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆25Updated 2 months ago
- Generate markdown notebooks from ImageJ Macro☆23Updated 3 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆48Updated last week
- MultiModal Big Image Data Sharing and Exploration☆14Updated last year
- A fast multi-image tiff writer for Matlab☆18Updated 5 months ago
- Control, reconstruction, and analysis code for oblique plane microscopy.☆21Updated 3 months ago
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆69Updated 5 months ago
- ☆31Updated 6 months ago
- ☆19Updated 8 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆60Updated 2 weeks ago
- Online documentation and reference for CLIJ☆28Updated 3 years ago
- ☆21Updated 4 months ago