vsbuffalo / qrqcLinks
Quick Read Quality Control
☆20Updated 2 years ago
Alternatives and similar repositories for qrqc
Users that are interested in qrqc are comparing it to the libraries listed below
Sorting:
- ☆18Updated 10 years ago
- ☆18Updated 8 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 5 months ago
- Genomic plot in trellis layout☆41Updated last year
- Ebola virus surveillance☆15Updated 9 years ago
- TOP results by CONfident efFECT Sizes.☆14Updated 11 months ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 4 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 8 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)☆46Updated last month
- Toolbox for generic NGS analyses - A framework to quickly build pipelines and to perform large-scale NGS analysis☆18Updated 3 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 2 months ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 8 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- ☆43Updated 9 years ago
- Talk to the NCBI EUtils☆22Updated 5 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated 2 years ago
- Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R☆36Updated 3 years ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- Allele frequency filter app☆14Updated 3 years ago
- R interface to 'Gos'☆39Updated 2 years ago
- ☆22Updated 8 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- Generate HTML report for a set of genomic regions or DESeq2/edgeR results☆10Updated 10 months ago