The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites
☆78Nov 6, 2026Updated this week
Alternatives and similar repositories for sgn
Users that are interested in sgn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Germinate is an open source plant database infrastructure and application programming platform on which complex data from genetic resourc…☆22Updated this week
- Repository for version control of the BrAPI specifications☆79Updated this week
- An ontology database for crops' traits with their variables☆24Apr 9, 2025Updated last year
- Lightweight workflows in bioinformatics:☆24Nov 5, 2014Updated 12 years ago
- ☆82Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Hagfish - assess an assembly through creative use of coverage plots☆37Aug 9, 2012Updated 14 years ago
- An R package to use the Breeding API (BrAPI) for accessing plant breeding data.☆12Dec 18, 2019Updated 6 years ago
- The Dockerfiles for breeDBase☆13Updated this week
- The starting point for raising issues for Libero Publisher☆16Mar 25, 2020Updated 6 years ago
- A versatile, fully open-source pipeline to extract phenotypic measurements from plant images☆52Oct 6, 2026Updated last month
- 这是一个基于AIot技术的智能育种箱，集成了温湿度、光照、浇灌、气体等一系列环境参数的监控和控制功能。☆12Mar 8, 2025Updated last year
- An open-source software for designing print-ready plot labels affixed with QR codes☆20Aug 26, 2026Updated 2 months ago
- Personal portal☆15Oct 21, 2019Updated 7 years ago
- Practical Haplotype Graph (PHG) version 2☆36Oct 23, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- RelocaTE2☆19Oct 6, 2023Updated 3 years ago
- Mixed model laboratory☆66Updated this week
- A web application for interactive visualization and exploratory data analysis of variant call matrices☆23Jul 17, 2023Updated 3 years ago
- ☆13Updated this week
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆23Aug 12, 2026Updated 2 months ago
- scripts and intermediate files used to annotate TEs in Jiao et al.☆34Apr 12, 2018Updated 8 years ago
- The 3rd incarnation of the Wise package for sequence analysis☆23Jun 19, 2014Updated 12 years ago
- ☆11Jan 14, 2025Updated last year
- A deeplearning driving bioinformatic toolkit.☆25Jul 14, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Repository for Colantonio et al., 2022, "Metabolomic Selection for Enhanced Fruit Flavor"☆12Feb 7, 2022Updated 4 years ago
- Genetic maps in autopolyploids☆33Jan 12, 2026Updated 9 months ago
- ☆16Jun 30, 2022Updated 4 years ago
- Opensilex is an information system for scientific research data management☆27Updated this week
- Minimum Information About a Plant Phenotyping Experiment☆45Jan 7, 2026Updated 10 months ago
- Breakpointer is a fast algorithm to locate breakpoints of structural variants from single-end reads produced by next-generation sequencin…☆10May 2, 2014Updated 12 years ago
- R package for fitting high-dimensional multivariate linear mixed effect models☆41Sep 16, 2026Updated last month
- In-Field Phenotyping Based on Crop Leaf and Plant Instance Segmentation☆22Jul 14, 2023Updated 3 years ago
- Perform GWAS using the FarmCPU model.☆27Dec 14, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The repository for codes developed to generated the Maize NC358 assemblies and analyses.☆10Apr 23, 2020Updated 6 years ago
- A JBrowse plugin for viewing GWAS data☆13Feb 13, 2022Updated 4 years ago
- Code and example datasets for Does[0]Compute☆12Dec 2, 2021Updated 4 years ago
- ☆12Apr 10, 2021Updated 5 years ago
- A fully featured web app to import images and photoshop documents for use in Supernote atelier.☆11Apr 26, 2025Updated last year
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆32Apr 2, 2026Updated 7 months ago
- Pipeline to Extract Plant Phenotypes from Reference Data☆25Feb 24, 2025Updated last year