ChengF-Lab / deepDR
☆52Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for deepDR
- Heterogeneous disease-gene-related☆17Updated 3 years ago
- ☆19Updated 4 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- ☆24Updated 7 years ago
- ☆32Updated 3 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆24Updated 3 years ago
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆30Updated last year
- NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions☆74Updated 3 years ago
- GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction☆25Updated 3 years ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆30Updated last year
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆23Updated 2 years ago
- ☆31Updated 5 years ago
- ☆62Updated last year
- Realizing DTINet with python☆27Updated 6 years ago
- ☆16Updated 3 years ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆15Updated last year
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆26Updated 2 years ago
- Predicting drug-target interaction using multi-label learning with community detection method (DTI-MLCD)☆10Updated 4 years ago
- ☆55Updated 4 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆108Updated 2 years ago
- ☆14Updated 2 years ago
- This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…☆89Updated last year
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆53Updated 4 years ago
- Disease Gene Prioritization with Privileged Information and Heteroscedastic Dropout☆11Updated 3 years ago
- Random Walk with Restart on Multiplex and Heterogeneous Biological Networks☆34Updated 4 years ago
- ☆12Updated 5 years ago
- ☆23Updated 10 months ago
- Code repository for "Prioritizing Repurposable Drugs for SARS-CoV-2 using Deep Learning and Population-based Validation"☆14Updated 2 years ago
- ☆21Updated 3 years ago
- A Network Integration Approach for Drug-Target Interaction Prediction☆174Updated 2 years ago