alberto-valdeolivas / RWR-MH
Random Walk with Restart on Multiplex and Heterogeneous Biological Networks
☆33Updated 4 years ago
Related projects: ⓘ
- ☆50Updated 5 years ago
- Heterogeneous disease-gene-related☆16Updated 3 years ago
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆108Updated 2 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆23Updated 3 years ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆30Updated last year
- ☆24Updated 7 years ago
- this is the source code and data☆18Updated 5 years ago
- ☆19Updated 4 years ago
- BNNR is a novel computational method, which utilizes Bounded Nuclear Norm Regularization algorithm to identify potential novel indication…☆11Updated 2 years ago
- Network-based project to explore gene connectivity through biological scales☆20Updated 2 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆51Updated 3 years ago
- ☆62Updated last year
- The source codes for our paper submitted to Neurocomputing in 2017. We propose a linear label propagation method (LPLNP method) to predic…☆17Updated 7 years ago
- Gene ontology (GO) semantic similarity library for Python☆21Updated 5 years ago
- Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.☆32Updated last year
- ☆17Updated 6 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆13Updated 5 years ago
- ☆17Updated 3 years ago
- drugbank相关数据的处理,包括获取药物sdf结构文件,drug相关信息,drug作用相关蛋白信息,drugbank中drug id与其他数据库的映射,protein蛋白相关信息到其他数据库的映射☆12Updated 3 years ago
- PGCN: Disease gene prioritization by disease and gene embedding through GCN☆77Updated 5 months ago
- This repository contains the tensorflow implementation of "GNE: A deep learning framework for gene network inference by aggregating biolo…☆31Updated 3 years ago
- Prediction of lncRNA-disease associations based on inductive matrix completion☆20Updated 5 years ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Updated 3 years ago
- ☆33Updated 6 years ago
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆55Updated 3 years ago
- Gene2Vec: Distributed Representation of Genes Based on Co-Expression☆102Updated 2 years ago
- Cancer Drug Response prediction using a Recommender System☆41Updated last year
- Realizing DTINet with python☆27Updated 6 years ago
- ☆13Updated 4 years ago
- OhmNet: Representation learning in multi-layer graphs☆78Updated 4 years ago