Alternatives and similar repositories for singularity2docker:

Users that are interested in singularity2docker are comparing it to the libraries listed below

• stjude / indelPost
  Python library for simple and complex indels.
  ☆13Updated last year
• snakemake / snakedeploy
  deploy a snakemake pipeline directly from version control (under development)
  ☆22Updated 2 months ago
• gogetdata / ggd-cli
  The command-line interface to GGD
  ☆42Updated 2 years ago
• NCI-GDC / gdc-dnaseq-cwl
  CWL for GDC DNASeq workflows
  ☆22Updated 6 months ago
• cancerit / cgpBigWig
  BigWig manpulation tools using libBigWig and htslib
  ☆28Updated 5 months ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• beardymcjohnface / Nektool
  Cookiecutter profile for making a NextFlow-based bioinformatics tool
  ☆16Updated 6 months ago
• rioualen / gene-regulation
  Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.
  ☆11Updated 7 years ago
• goeckslab / isoseq-browser
  ☆13Updated 7 years ago
• ctb / titus-blog
  My blog.
  ☆16Updated last month
• conda-incubator / conda-env-builder
  Build and maintain multiple custom conda environments all in one place.
  ☆37Updated last month
• brentp / geneimpacts
  prioritize effects of variant annotations from VEP, SnpEff, et al.
  ☆33Updated last month
• nf-core / kmermaid
  k-mer similarity analysis pipeline
  ☆20Updated this week
• dnanexus-archive / dx-cwl
  Import and run CWL workflows on DNAnexus (alpha)
  ☆13Updated 6 years ago
• fulcrumgenomics / pybedlite
  Lightweight Python interfaces for reading, writing, and querying Genomic Regions (BED)
  ☆14Updated last month
• carpentries-incubator / snakemake-novice-bioinformatics
  Introduction to Snakemake for Bioinformatics
  ☆19Updated this week
• hammerlab / bai-indexer
  Build an index for your BAM Index (BAI)
  ☆17Updated 9 years ago
• appris / appris
  Annotating principal splice isoforms
  ☆14Updated 3 months ago
• seqeralabs / nf-training-advanced
  Customer workshop materials
  ☆17Updated last year
• snakemake / snakeface
  The snakemake interface, currently works like a notebook (under development)
  ☆18Updated 3 years ago
• multimeric / TidyMultiqc
  Converts 'MultiQC' Reports into Tidy Data Frames
  ☆17Updated 9 months ago
• nextflow-io / nf-hack18
  Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/
  ☆18Updated 5 years ago
• nextflow-io / nf-sqldb
  SQL support plugin for Nextflow
  ☆26Updated this week
• roryk / bcbio.rnaseq
  Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …
  ☆24Updated 7 years ago
• percyfal / snakemake-rules
  Library of snakemake rules.
  ☆12Updated 6 years ago
• epruesse / ymp
  Flexible omics pipeline
  ☆18Updated 6 months ago
• galaxyproject / cargo-port
  cache packages permanently
  ☆13Updated 6 months ago
• seqeralabs / tower-cli
  Nextflow Tower CLI tool
  ☆44Updated this week
• HpcGridRunner / HpcGridRunner
  source code for HpcGridRunner
  ☆17Updated 3 years ago
• seandavi / GFFutils
  Convert, explore, and manipulate GFF and GTF files (used in bioinformatics) using a sqlite-based approach
  ☆35Updated 14 years ago