Alternatives and similar repositories for Methylotl:

Users that are interested in Methylotl are comparing it to the libraries listed below

• Python-BI-2023 / course_materials
  This is repo for the materials of the BI2023 python course
  ☆20Updated 8 months ago
• serjisa / transcriptomics.msu
  Materials for Transcripromics Data Analysis course at Moscow State University
  ☆62Updated 9 months ago
• danon6868 / BI-ml-2024
  Course "Machine learning" in Bioinformatics Institute
  ☆15Updated 8 months ago
• ComputationalAgingLab / ComputAge
  A library for full-stack aging clocks design and benchmarking.
  ☆26Updated 7 months ago
• rnnh / bioinfo-notebook
  🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
  ☆160Updated 4 years ago
• CompEpigen / figeno
  Tool for plotting sequencing data along genomic coordinates.
  ☆256Updated 2 months ago
• hbctraining / Intro-to-ChIPseq-flipped
  ☆85Updated 6 months ago
• crazyhottommy / TCR-BCR-seq-analysis
  T/B cell receptor sequencing analysis notes
  ☆216Updated last month
• kaizhang / SnapATAC2
  Single-cell epigenomics analysis tools
  ☆244Updated 3 weeks ago
• CebolaLab / RNA-seq
  Step-by-step analysis pipeline for RNA-seq data
  ☆87Updated last year
• hms-dbmi / hic-data-analysis-bootcamp
  Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.
  ☆193Updated 6 years ago
• ablab / IsoQuant
  Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)
  ☆154Updated this week
• hbctraining / Intro-to-ChIPseq
  Intro to ChIPseq using HPC
  ☆293Updated last year
• nextflow-io / training
  Nextflow training material
  ☆135Updated this week
• kundajelab / chrombpnet
  Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)
  ☆135Updated last week
• liulab-dfci / TRUST4
  TCR and BCR assembly from RNA-seq data
  ☆291Updated 2 weeks ago
• mortazavilab / PyWGCNA
  PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
  ☆230Updated 2 months ago
• nservant / HiC-Pro
  HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
  ☆392Updated 9 months ago
• mdozmorov / HiC_data
  A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.
  ☆179Updated 3 months ago
• deeptools / HiCExplorer
  HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.
  ☆237Updated last month
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆129Updated last week
• Boyle-Lab / Blacklist
  Application for making ENCODE Blacklists
  ☆280Updated 3 years ago
• 10XGenomics / cellranger
  10x Genomics Single Cell Analysis
  ☆378Updated last month
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆281Updated this week
• slowkow / awesome-vdj
  📚 Tools and databases for analyzing HLA and VDJ genes.
  ☆216Updated last month
• cortes-ciriano-lab / SComatic
  A tool for detecting somatic variants in single cell data
  ☆182Updated 4 months ago
• harvardinformatics / bioinformatics-coffee-hour
  Short lessons from FAS Informatics coffee hour
  ☆144Updated last year
• nf-core / atacseq
  ATAC-seq peak-calling and QC analysis pipeline
  ☆195Updated last week
• Teichlab / scg_lib_structs
  Collections of library structure and sequence of popular single cell genomic methods
  ☆443Updated last month
• ISUgenomics / bioinformatics-workbook
  Bioinformatics Workbook repository
  ☆179Updated last week