Alternatives and similar repositories for mspcompiler:

Users that are interested in mspcompiler are comparing it to the libraries listed below

• MassBank / RMassBank
  Playground for experiments on the official http://bioconductor.org/packages/devel/bioc/html/RMassBank.html
  ☆12Updated 3 months ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆13Updated last year
• wkumler / RaMS
  R-based access to Mass-Spectrometry data
  ☆24Updated last month
• OrgMassSpec / OrgMassSpecR
  Organic/biological mass spectrometry data analysis (development version).
  ☆29Updated 7 years ago
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 2 years ago
• schymane / RChemMass
  Various Cheminformatic, Curation and Mass Spectrometry Functions
  ☆13Updated 4 years ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆25Updated last year
• sneumann / CAMERA
  This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data
  ☆11Updated 9 months ago
• oloBion / Retip
  Retip - Retention Time prediction for metabolomics
  ☆32Updated 7 months ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated last year
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆65Updated this week
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 2 years ago
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆9Updated 5 years ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆28Updated 5 months ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆14Updated 7 years ago
• phenomecentre / peakPantheR
  On-instrument and post-acquisition targeted feature extraction
  ☆12Updated 8 months ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆19Updated 7 months ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆13Updated last year
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆16Updated last year
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆15Updated 8 months ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆28Updated last month
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated 10 months ago
• kruvelab / MS2Tox
  MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS
  ☆15Updated last month
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆12Updated 8 months ago
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆32Updated 3 years ago
• AnP311 / Waters2mzML
  Waters2mzML converts & subsequently annotates Waters .raw MSn data (both MSe & DDA) into functional .mzML files. Obtained .mzML files can…
  ☆11Updated last year
• aberHRML / classyfireR
  R Interface to the ClassyFire REST API
  ☆10Updated 2 years ago
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆10Updated last month