PreibischLab / multiview-reconstructionLinks
Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data
☆27Updated 2 weeks ago
Alternatives and similar repositories for multiview-reconstruction
Users that are interested in multiview-reconstruction are comparing it to the libraries listed below
Sorting:
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆12Updated 3 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated 2 months ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- Create 3D/4D animations using a natural language-based syntax☆60Updated last month
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆85Updated last year
- GPU accelerated 3D image deconvolution using CUDA☆35Updated 11 months ago
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- TensorFlow Deconvolution for Microscopy Data☆90Updated 3 years ago
- Lattice light-sheet post-processing utility.☆29Updated last week
- ☆20Updated 2 weeks ago
- Library for producing and processing on the Adaptive Particle Representation (APR).☆49Updated 3 months ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆65Updated last week
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 10 months ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆42Updated 2 weeks ago
- GPU accelerated image/volume processing in Python☆111Updated 2 months ago
- python tools for BigDataViewer☆22Updated 6 months ago
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆45Updated 4 months ago
- CLIJ is deprecated. Visit CLIJ2☆56Updated 4 years ago
- GPU-accelerated image processing using CLIJ via pyimagej in python☆10Updated 4 years ago
- ☆21Updated 3 years ago
- ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)☆19Updated last month
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- ☆25Updated 4 months ago
- ImageJ convenience layer for N5☆17Updated last month
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆33Updated last month
- The python-microscopy environment - an open-source package for light microscopy☆89Updated last month
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated last year
- Read Olympus image files (OIF and OIB).☆13Updated 2 months ago
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18Updated 5 years ago