WU-BIMAC / NBOMicroscopyMetadataSpecsLinks
The 4DN + BINA Tiered System of Microscopy Metadata Guidelines was developed by the 4DN Imaging Standards Working Group in collaboration with the BINA Data Management and Quality Control Working Group (https://www.bioimagingna.org/qc-dm-wg) for documenting microscopy experiments and assessing the quality of image data.
☆15Updated 2 years ago
Alternatives and similar repositories for NBOMicroscopyMetadataSpecs
Users that are interested in NBOMicroscopyMetadataSpecs are comparing it to the libraries listed below
Sorting:
- python tools for BigDataViewer☆22Updated 7 months ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆19Updated 2 months ago
- Browse your OMERO database from within napari.☆38Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 3 months ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- A napari plugin for zarr backed OME-NGFF images☆33Updated this week
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 4 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- ☆49Updated this week
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last month
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated last month
- Running compute-intense parts of BigStitcher distributed☆26Updated 2 weeks ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆78Updated last month
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- Denoising via adaptive binning.☆12Updated last year
- MultiModal Big Image Data Sharing and Exploration☆16Updated 2 years ago
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- ☆12Updated 2 months ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 3 years ago
- ☆13Updated 5 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- 3D/4D volumetric rendering of microscopy data☆24Updated 3 months ago
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆46Updated last week
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated this week
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 8 months ago
- ☆38Updated last year
- Python module for registering and fusing multi-view microscopy data☆23Updated 5 months ago
- Multiple file format reading directly into napari using pure Python☆37Updated last year
- ☆37Updated this week