fiji / SPIM_Registration
Deprecated, instead check out: https://github.com/preibischLab/multiview-reconstruction & https://github.com/PreibischLab/BigStitcher
☆23Updated 5 months ago
Alternatives and similar repositories for SPIM_Registration:
Users that are interested in SPIM_Registration are comparing it to the libraries listed below
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 5 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 2 months ago
- Little OBjects Segmentation and Tracking EnviRonment☆9Updated 4 years ago
- PSFj - Know your microscope fluorescence☆21Updated 4 years ago
- Lattice light-sheet post-processing utility.☆27Updated 2 weeks ago
- Create 3D/4D animations using a natural language-based syntax☆58Updated last year
- A collection of 3D image processing functions and applications with GPU implementation☆13Updated 3 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆39Updated 3 months ago
- Core functionality of NanoJ☆15Updated 10 months ago
- Fiji plugins for starting BigDataViewer and exporting data.☆21Updated 4 months ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆38Updated last week
- ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)☆14Updated last year
- A tool for manual pointwise deformable registration using bigdataviewer.☆27Updated last week
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Updated 2 years ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 5 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆69Updated last week
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆61Updated 2 weeks ago
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆44Updated this week
- CLIJ is deprecated. Visit CLIJ2☆56Updated 3 years ago
- ☆34Updated 9 months ago
- ImageJ convenience layer for N5☆16Updated this week
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆24Updated 2 years ago
- ☆21Updated 3 years ago
- Control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated last week
- An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)☆12Updated 2 years ago
- ☆12Updated 4 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- my first baby steps with Napari☆10Updated 5 years ago
- Detection of Molecules plugin for ImageJ, Utrecht University☆15Updated 2 years ago
- Online documentation and reference for CLIJ☆28Updated 3 years ago