DomBennett / treemanLinks
An R package for manipulating phylogentic trees
☆11Updated 4 years ago
Alternatives and similar repositories for treeman
Users that are interested in treeman are comparing it to the libraries listed below
Sorting:
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆24Updated last week
- R/Shiny application for viewing microbial community data☆19Updated 4 years ago
- ☆20Updated last year
- Tools to make it easy to work with microtiter plate-shaped data☆24Updated 9 months ago
- Create and Query a Local Copy of GenBank in R☆27Updated 5 months ago
- a take on ordination plots using ggplot2☆65Updated last year
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- A book for teaching people how to do comparative methods in R☆22Updated 2 years ago
- R interface to GenBank/GenPept files☆14Updated 4 years ago
- taxonomic classes for R☆49Updated 2 weeks ago
- Interface to Open Tree of Life API☆44Updated 2 years ago
- taxonomy R packages☆44Updated last year
- a quick shiny server in a Singularity Container. For @griznog!☆17Updated 6 years ago
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆56Updated last year
- Ordination lectures for Ecological Methods in Oulu☆19Updated last year
- An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data☆19Updated last year
- Tools for Working with Taxonomic SQL Databases☆33Updated last month
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- ☆18Updated 8 years ago
- phylogenetic networks using ggplot2 and ggtree☆14Updated 7 months ago
- Visualization methods for omics dataset quality control☆10Updated 3 weeks ago
- Access sequences from the 1000 Plant Initiative (1KP)☆13Updated 2 years ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Updated last year
- An Amazing Shiny App☆17Updated 3 years ago
- An R interface to the Nexus Class Library (C++) to read in quickly large phylogenetic trees and data☆9Updated 2 years ago
- An application to compare genetic maps with D3 & Shiny☆22Updated 2 years ago
- A textbook for phylogenetic comparative methods.☆44Updated 5 years ago
- population genetic simulations with R and Shiny☆28Updated 9 months ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆21Updated 3 weeks ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Updated 6 months ago