ArianeMora / scivaeLinks
VAE package for reproducible generative models of biological data
☆11Updated 8 months ago
Alternatives and similar repositories for scivae
Users that are interested in scivae are comparing it to the libraries listed below
Sorting:
- Graph Neural Networks with Multiple Prior Knowledge for Multi-Omics Data Analysis☆11Updated 2 years ago
- A data analysis package for high-dimensional, multi-block data.☆12Updated 3 years ago
- Main codes for AD epigenetics paper by Nativio et al.☆11Updated 5 years ago
- Source code for integrative nonnegative matrix factorization☆19Updated 7 years ago
- TCGA data acquisition and processing for Project Cognoma☆20Updated 7 years ago
- Similarity Network Fusion☆32Updated 10 years ago
- A 450k tutorial in the form of an R package☆12Updated 9 years ago
- Classification of Single cells by Transfer Learning☆10Updated 4 years ago
- Subtyping tool for multi-omic data☆13Updated 3 years ago
- jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data☆32Updated 6 years ago
- Working example of snakemake tutorial using UAB Cheaha computing cluster via SLURM scheduler☆10Updated 6 years ago
- TensorFlow-Implementation of Deep Archetypal Analysis☆13Updated 4 years ago
- DeepCC: a novel deep learning-based framework for cancer molecular subtype classification☆20Updated 3 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆44Updated 5 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated 2 years ago
- ☆21Updated 6 years ago
- Python-based Illumina methylation array analysis software☆17Updated last year
- ASAP : Automated Single-cell Analysis Pipeline☆27Updated 3 months ago
- Python utilities for building integrated views of TCGA data.☆32Updated 7 years ago
- Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element☆11Updated 4 years ago
- End-to-End learning framework for circular RNA classification from other long non-coding RNA using multimodal deep learning☆24Updated 5 years ago
- Machine learning tutorial for biologists, designed for Oz Single Cells 2019☆15Updated 6 years ago
- 📓Notebook of Climente-González et al. (2017), The Functional Impact of Alternative Splicing in Cancer.☆14Updated 7 years ago
- This is a read-only mirror of the CRAN R package repository. SNFtool — Similarity Network Fusion☆21Updated 4 years ago
- Microarray Analysis Pipeline in Python☆19Updated 6 years ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 2 years ago
- ☆12Updated 3 years ago
- ☆16Updated 5 years ago
- TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/☆36Updated 4 years ago
- Modelling DNA methylation profiles☆23Updated 5 years ago