Alternatives and similar repositories for spec2vec

Users that are interested in spec2vec are comparing it to the libraries listed below

• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆71Updated last week
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆59Updated last year
• matchms / matchms
  Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.
  ☆238Updated this week
• iomega / spec2vec_gnps_data_analysis
  Analysis and benchmarking of mass spectra similarity measures using gnps data set.
  ☆24Updated 4 years ago
• samgoldman97 / mist
  Encoding MS/MS spectra using formula transformers for inferring molecular properties
  ☆68Updated last year
• merlin-ms / awesome-mass-spectral-libraries
  ☆22Updated 2 months ago
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆23Updated 6 months ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆30Updated 11 months ago
• YuanyueLi / SpectralEntropy
  The similarity score for spectral comparison
  ☆82Updated 9 months ago
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆33Updated 2 years ago
• mwang87 / NP-Classifier
  ☆25Updated 5 months ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆23Updated last year
• pnnl / darkchem
  ☆33Updated 11 months ago
• Philipbear / msbuddy
  a python package for molecular formula analysis in MS-based small molecule studies
  ☆32Updated 4 months ago
• XiminHu / mass-suite
  ☆29Updated last year
• eMetaboHUB / FragHub
  ☆14Updated last week
• pnnl / MSAC
  ☆23Updated 8 months ago
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated 2 weeks ago
• hcji / DeepMASS
  A known-to-unknown metabolite identification workflow
  ☆21Updated 5 years ago
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆19Updated last year
• meowcat / MSNovelist
  ☆72Updated last year
• sirius-ms / sirius
  SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…
  ☆128Updated last month
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆53Updated last month
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆58Updated 2 weeks ago
• pnnl / deimos
  ☆36Updated this week
• lmsac / DeepDIA
  Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.
  ☆43Updated 3 years ago
• bittremieuxlab / spectrum_utils
  Python package for efficient mass spectrometry data processing and visualization
  ☆159Updated last week
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆30Updated last month
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆34Updated last month
• CompOmics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆72Updated 2 months ago