Course materials for "Linux programming for Bioinformatics"
☆51Mar 3, 2026Updated 4 months ago
Alternatives and similar repositories for bio2503
Users that are interested in bio2503 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- hands-on for NGS/SNParray CNV call trainning☆19Jun 13, 2022Updated 4 years ago
- SemI-SUpervised generative Autoencoder models for single cell data☆18Mar 30, 2021Updated 5 years ago
- ☆15Feb 5, 2024Updated 2 years ago
- All data and notebook for my 2020 scRNA-seq analysis workshop☆18Jul 27, 2020Updated 5 years ago
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆19Mar 27, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆18Feb 22, 2022Updated 4 years ago
- SLICER algorithm for inferring cell trajectories. See details in Welch et al., Genome Biology 2016: http://genomebiology.biomedcentral.co…☆16Oct 17, 2017Updated 8 years ago
- ☆14Feb 4, 2015Updated 11 years ago
- ☆23Jun 29, 2018Updated 8 years ago
- An algorithm used to classify the cell types from single cell rna sequence data.☆10Jan 24, 2021Updated 5 years ago
- Scripts and files for the annual Short Read Analysis Workshop☆19Jul 17, 2026Updated last week
- Metagenomics Workshop☆27Nov 23, 2016Updated 9 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 4 years ago
- GrandPrix☆17May 27, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Solutions to Programming Assignments for Bioinformatics Algorithms (Part 1) on Coursera.org☆30Jan 22, 2014Updated 12 years ago
- DeepWAS: Directly integrating regulatory information into GWAS using machine learning☆18Mar 14, 2019Updated 7 years ago
- Material for a workshop on reproducible science with R and RStudio☆15May 22, 2022Updated 4 years ago
- Version 2.1.0 released☆23Sep 16, 2019Updated 6 years ago
- Course material in notebook format for learning about single cell bioinformatics methods☆100Jun 19, 2016Updated 10 years ago
- Pawsey workshop: containers for bioinformatics☆21Dec 3, 2018Updated 7 years ago
- Hands-on workflow for learning metagenomics including DNA mapping, binning, QC and annotation. Answers and example code available in the…☆16Mar 25, 2022Updated 4 years ago
- Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…☆18Jul 23, 2020Updated 6 years ago
- ☆29Dec 21, 2015Updated 10 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆44Nov 20, 2017Updated 8 years ago
- R package to detect splicing QTLs (sQTLs)☆15Feb 28, 2021Updated 5 years ago
- Client to access ExperimentHub resources☆11Jun 15, 2026Updated last month
- HTSanalyzeR2: A R package for gene set enrichment and network analysis of various high-throughput data☆14Dec 2, 2020Updated 5 years ago
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆17Feb 25, 2019Updated 7 years ago
- Munin plugin for Tor, moved to https://github.com/munin-monitoring/contrib/blob/master/plugins/tor/tor_☆14May 1, 2020Updated 6 years ago
- Jupyter notebooks to more effectively leverage computational resources at NCBI.☆31Aug 16, 2017Updated 8 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Apr 19, 2021Updated 5 years ago
- Illustrating Python via examples from bioinformatics☆14Jun 14, 2016Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆21Dec 6, 2018Updated 7 years ago
- Lecture resources for Python for Bioinformatics EANBiT course.☆23Feb 21, 2019Updated 7 years ago
- analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…☆11Aug 1, 2021Updated 4 years ago
- ATAC-seq lab for BIOINF545☆24Feb 17, 2026Updated 5 months ago
- We have moved to https://github.com/limix/limix.☆23Aug 29, 2017Updated 8 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- scDeepCluster for Single Cell RNA-seq data☆106Jul 10, 2024Updated 2 years ago