Alternatives and similar repositories for BookChapter-RNA-Seq-Analyses

Users that are interested in BookChapter-RNA-Seq-Analyses are comparing it to the libraries listed below

• sonali-bioc / UncertaintyRNA
  This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…
  ☆29Updated 2 years ago
• carpentries-incubator / bioc-rnaseq
  Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
  ☆27Updated this week
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 6 years ago
• BIMSBbioinfo / HOT-or-not-examining-the-basis-of-high-occupancy-target-regions
  HOT regions paper
  ☆11Updated 6 years ago
• Kuanhao-Chao / RNASeqR
  📊 An R package of RNA-seq workflow
  ☆15Updated 3 years ago
• NBISweden / workshop-epigenomics-RTDs
  workshop website on readthedocs
  ☆21Updated 4 months ago
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆24Updated 7 months ago
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆37Updated last year
• ELTEbioinformatics / mulea
  mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
  ☆28Updated 2 weeks ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆44Updated 10 months ago
• CompEpigen / methrix
  An R for fast and flexible DNA methylation analysis
  ☆35Updated 2 months ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated last month
• hbctraining / Intro-to-R-with-DGE
  ☆61Updated 4 years ago
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆61Updated last year
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated 2 years ago
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆25Updated 6 years ago
• jokergoo / cola
  A General Framework for Consensus Partitioning
  ☆65Updated last week
• metaOmics / metaOmics
  Shiny GUI application for genomics meta-analysis
  ☆22Updated 5 years ago
• Core-Bioinformatics / bulkAnalyseR
  ☆29Updated 2 years ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• bioinformatics-core-shared-training / cruk-summer-school-2020
  Web-site for the 2020 CRUK CC Bioinformatics Summer School (Held virtually)
  ☆24Updated 4 years ago
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 6 years ago
• BIMSBbioinfo / pigx_rnaseq
  Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline
  ☆21Updated last week
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆32Updated last year
• sa-lee / superintronic
  A tidy interface for coverage analysis
  ☆31Updated 5 years ago
• ge11232002 / TFBSTools
  Software Package for Transcription Factor Binding Site (TFBS) Analysis
  ☆32Updated 10 months ago
• sirselim / illumina450k_filtering
  A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
  ☆29Updated 2 years ago
• jokergoo / KeywordsEnrichment
  ☆32Updated 2 years ago
• openbiox / Awesome-Bioinformatics-Workflow-Chinese
  Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目
  ☆27Updated 5 years ago