rhondene / data_science_ML_lessons_biologyLinks
Tutorials on data science/machine learning using Python with a life-science perspective. When I started learning programming and machine learning, most of the examples were from other fields like IT or business, so sometimes I found it difficult to apply those skills to biological problems. I help make data science and machine learning more rel…
☆13Updated 3 years ago
Alternatives and similar repositories for data_science_ML_lessons_biology
Users that are interested in data_science_ML_lessons_biology are comparing it to the libraries listed below
Sorting:
- Pandas ExtensionDtypes for dealing with genomics data☆47Updated 7 months ago
- Here I show how to use Deep Learning for biological and biomedical Data Integration.☆11Updated 5 years ago
- ☆56Updated last year
- Applied Statistics for High-Throughput Biology☆16Updated 5 months ago
- Here I explain the math behind UMAP and show how to program it from scratch in Python☆38Updated 4 years ago
- interpret deep learning models in a framework-independent fashion☆41Updated 3 months ago
- Demo of Hydra☆18Updated 3 years ago
- Deep learning based alignment-free method for protein family modeling and prediction☆16Updated 7 years ago
- A case study on Pfam dataset to classify protein families.☆32Updated 6 years ago
- Deep learning library for biological sequences. Extension of Fastai and Pytorch.☆39Updated 6 months ago
- Implementation of Protein Classification based on subcellular localization using ProtBert(Rostlab/prot_bert_bfd_localization) model from …☆42Updated last year
- Machine Learning in Biotechnology using Python, published by Packt☆96Updated 2 weeks ago
- Using PubMed to find out how a gene contributes to addiction.☆20Updated 3 years ago
- Disease pathways in the human interactome☆23Updated 7 years ago
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Updated 2 years ago
- A mini-framework to build and train neural networks for molecular biology.☆10Updated 7 years ago
- Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)☆98Updated 3 years ago
- Explore biomolecular pathways in Reactome from the command-line or a Python script☆25Updated last year
- a super basic tutorial on how to create a pytorch models for raw DNA sequences☆26Updated 3 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- Multi-omics module that includes RNAseq, Epigenetics, and integrated multi-omics analyses developed as part of the NIGMS Sandbox project☆10Updated 6 months ago
- ☆15Updated 4 years ago
- Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.☆11Updated 5 years ago
- Recreation of the DNA Sequence Classification Paper☆12Updated 9 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆32Updated 5 months ago
- Proof of concept code from Gretel.ai and Illumina using generative neural networks to create synthetic versions of mouse genotype and phe…☆33Updated 3 years ago
- ☆22Updated 4 years ago
- Sequence data label generation and ingestion into deep learning models☆11Updated 4 years ago
- ☆14Updated last year
- ☆25Updated 3 years ago