mitmedialab / EvolutronLinks
A mini-framework to build and train neural networks for molecular biology.
☆10Updated 7 years ago
Alternatives and similar repositories for Evolutron
Users that are interested in Evolutron are comparing it to the libraries listed below
Sorting:
- ☆25Updated 3 years ago
- ☆34Updated 5 years ago
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆15Updated 11 years ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆36Updated 4 years ago
- Deep convolutional networks for fold recognition☆22Updated 6 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- Deep learning based alignment-free method for protein family modeling and prediction☆16Updated 7 years ago
- This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …☆58Updated 3 years ago
- ☆26Updated 3 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- Code to accompany my blog post "Dissecting the Hype With Cheminformatics"☆12Updated 6 years ago
- Learning structural motif representations for efficient protein structure search☆19Updated 8 years ago
- Supplementary data for the ACME algorithm☆23Updated 3 years ago
- ☆13Updated 5 years ago
- Machine learning framework for predicting the responses of drug combinations in pre-clinical studies, such as those based on cell lines o…☆26Updated 5 years ago
- ☆18Updated 9 months ago
- a protein descriptor for site prediction☆16Updated 6 years ago
- ☆12Updated 2 years ago
- protein embedding project☆12Updated 7 years ago
- A deep learning framework for predicting chemical synthesis☆26Updated last year
- Information sharing portal about nCov/SARS/MERS for drug discovery☆38Updated last year
- Homology reduced UniProt, train-/valid-/testsets for language modeling☆16Updated 3 years ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 6 years ago
- Pytorch implementation of BionoiNet, which is a deep learning-based software to classify ligand-binding sites.☆20Updated 4 years ago
- Protein function prediction using a variational autoencoder☆95Updated 7 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Updated 6 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆74Updated 2 years ago
- MHCAttnNet: Allele-Peptide predictions for class I & class II MHC alleles☆30Updated 4 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Updated 3 years ago