NikolayOskolkov / DeepLearningDataIntegration
Here I show how to use Deep Learning for biological and biomedical Data Integration.
☆11Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for DeepLearningDataIntegration
- In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data☆17Updated 6 years ago
- The Baseline Site Selection Tool implements simulation tools for clinical trial enrollment.☆18Updated 2 years ago
- Search public databases for given genotypic information☆10Updated 6 years ago
- Short course using RStudio for biological data analysis☆13Updated 2 years ago
- Coherent Deconfounding Autoencoder (CODE-AE) can extract both common biological signals shared by incoherent samples and private represen…☆16Updated last month
- Testing if UMAP/tSNE overfit their intrinsic dimensionality☆13Updated last year
- Applied Statistics for High-Throughput Biology☆16Updated 3 months ago
- Machine learning on electronic health records☆11Updated 6 years ago
- ☆21Updated 7 years ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated last year
- Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…☆17Updated last year
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆25Updated 7 months ago
- R package for Cardiovascular Risk Dataset and Data generation script☆13Updated 5 years ago
- Multifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features☆14Updated 6 years ago
- Network inference by fusing data from diverse distributions☆14Updated 7 years ago
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)☆9Updated 3 years ago
- Pandas ExtensionDtypes for dealing with genomics data☆47Updated 2 weeks ago
- Tools for building and manipulating graphs in Python☆41Updated last year
- A fast, accurate, and modularized dimensionality reduction approach based on diffusion harmonics and graph layouts. Escalates to millions…☆47Updated 3 years ago
- Similarity search in heterogeneous knowledge graphs using meta paths.☆24Updated last year
- ☆15Updated 4 years ago
- Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"☆31Updated 5 years ago
- jinja2-enabled jupyter notebooks☆35Updated 3 months ago
- ☆19Updated 3 years ago
- Using PubMed to find out how a gene contributes to addiction.☆21Updated last year
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆39Updated 3 years ago
- ☆10Updated 3 years ago
- Network-based Drug Repurposing for Human Coronavirus☆40Updated 4 years ago
- PETAL (ParallEl paThways AnaLyzer): a Python tool for deep biological pathway analysis☆35Updated last year