MatthewBCooke / Pathfinder
Search Strategy analysis and more for spatial navigation data in rodents
☆28Updated 3 months ago
Related projects: ⓘ
- R Scripts to analyze deep lab cut point data and related data☆60Updated last year
- ☆18Updated 7 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆34Updated last year
- ☆11Updated 8 years ago
- Histology processing☆61Updated 6 months ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14Updated 5 years ago
- ☆51Updated 3 weeks ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆24Updated 2 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆65Updated this week
- Fiber photometry analysis☆19Updated 2 months ago
- "Approaches to Study Neural Circuits" course☆63Updated 3 years ago
- A GUI and library for doing multi-fiber photometry☆17Updated 6 years ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆45Updated 4 months ago
- Fiber Photometry Modular Analysis Tool Suite☆32Updated 3 years ago
- ☆18Updated 2 years ago
- ☆24Updated last year
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆25Updated 3 months ago
- Free, platform independent, behavior tracking software.☆118Updated 2 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆52Updated last year
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆12Updated 2 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆42Updated last week
- A gui for browsing joint calcium imaging + behavioral data.☆49Updated last month
- pyqt5 dependent applications for IBL sessions☆23Updated 2 weeks ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated last year
- A head-mounted camera system integrates detailed behavioral monitoring with multichannel electrophysiology in freely moving mice☆25Updated 3 years ago
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆33Updated 3 months ago
- A tool to streamline extracellular electrophysiology analysis using SpikeInterface☆13Updated this week
- Match suite2p ROIs between imaging sessions☆21Updated 5 years ago
- Functions to assess quality of spike sorting results☆30Updated last year
- ☆13Updated 4 months ago