Alternatives and similar repositories for ManuscriptTools

Users that are interested in ManuscriptTools are comparing it to the libraries listed below

• grishkam / QuickFigures
  QuickFigures is a toolset for creating scientific figures see publication for details
  ☆37Updated last week
• sofroniewn / napari-training-course
  Lectures for a napari training course
  ☆50Updated 2 years ago
• quantixed / imagej-macros
  quantixed FIJI update site
  ☆17Updated last month
• BiAPoL / imagej-macro-cheat-sheet
  ☆20Updated 4 years ago
• clij / clij
  CLIJ is deprecated. Visit CLIJ2
  ☆56Updated 4 years ago
• Morwey / ezreverse
  A Python Shiny project with Joachim Goedhart
  ☆20Updated last year
• bigdataprocessor / bigdataprocessor2
  ☆24Updated 4 months ago
• finkelsteinlab / BioRxiv-Template
  MS Word templates for a more readable BioRxiv product
  ☆24Updated 7 years ago
• dougollerenshaw / figrid
  Utilities for formatting matplotlib figures
  ☆31Updated 11 months ago
• AndrewGYork / publication_template
  A template for writing scientific papers. View it in action here: https://andrewgyork.github.io/publication_template/
  ☆75Updated 6 years ago
• DanuserLab / u-shape3D
  Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…
  ☆31Updated 2 weeks ago
• kwolbachia / Visualization_toolset
  Imagej toolset to ease hyperstacks visualization and handling
  ☆23Updated last year
• georgeoshardo / SyMBac
  Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.
  ☆22Updated 6 months ago
• HenriquesLab / NanoJ-Fluidics
  Manual, source-code and binaries for the NanoJ-Fluidics project
  ☆52Updated 3 years ago
• bene51 / 3Dscript
  Create 3D/4D animations using a natural language-based syntax
  ☆61Updated 8 months ago
• AllenInstitute / aics-segmentation
  AICS Segmentation (One-Way) Mirror
  ☆45Updated 5 years ago
• CellMigrationLab / CellTracksColab
  A platform for compiling, analyzing, and exploring tracking data
  ☆48Updated this week
• kthorn / FPvisualization
  Visualization of fluorescent protein properties with d3.js
  ☆13Updated 9 years ago
• guiwitz / neubias_academy_biapy
  NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter
  ☆64Updated 2 years ago
• ScaDS / BIDS-lecture-2024
  Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…
  ☆39Updated last year
• kristinbranson / BABAM
  The Browsable Atlas of Behavior-Anatomy Maps (BABAM) is a GUI for exploring hypotheses of correlations between neural activity in regions…
  ☆13Updated 2 years ago
• clij / clij-docs
  Online documentation and reference for CLIJ
  ☆28Updated 4 years ago
• ImageScience / NeuronJ
  ImageJ plugin for neurite tracing and analysis
  ☆13Updated 5 years ago
• quantixed / manuscript-templates
  LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.
  ☆115Updated 2 weeks ago
• lowe-lab-ucl / arboretum
  Track and lineage visualization with btrack and Napari
  ☆45Updated 4 months ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆90Updated last week
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated last year
• saalfeldlab / stitching-spark
  Reconstruct big images from overlapping tiled images on a Spark cluster.
  ☆34Updated 2 years ago
• BioImaging-NKI / Cellpose-Fiji
  ImageJ macros to run Cellpose from Fiji (using the plugin from BIOP-EPFL) and to match nuclei and cell body label maps.
  ☆18Updated 10 months ago
• napari / napari.github.io
  website for the napari image viewer
  ☆47Updated this week