JingyiGF / HERBSLinks
☆18Updated 2 years ago
Alternatives and similar repositories for HERBS
Users that are interested in HERBS are comparing it to the libraries listed below
Sorting:
- ☆52Updated last year
- Histology processing☆72Updated last month
- Repository for BehaviorDEPOT pipeline app files and source code☆41Updated last month
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- Registration of cells across sessions.☆76Updated last year
- R Scripts to analyze deep lab cut point data and related data☆71Updated 3 years ago
- Calcium imaging inter-session alignment☆16Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆82Updated this week
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Collection of probe description for probeinterface☆17Updated 2 weeks ago
- Fiber photometry analysis☆23Updated 2 weeks ago
- Python package to handle probe layout, geometry and wiring to device.☆78Updated 2 weeks ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆75Updated this week
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated 2 months ago
- Tools to work with Allen Inst CCF data in matlab☆145Updated 6 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 11 months ago
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆62Updated 2 years ago
- SpikeGLX postprocessing [tshift filter CAR fix join extract]☆15Updated last month
- Free, platform independent, behavior tracking software.☆143Updated 7 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆55Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆141Updated this week
- pyqt5 dependent applications for IBL sessions☆32Updated 2 weeks ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated last week
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 3 weeks ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆47Updated last week