JingyiGF / HERBS
☆19Updated last year
Alternatives and similar repositories for HERBS:
Users that are interested in HERBS are comparing it to the libraries listed below
- Histology processing☆65Updated this week
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 6 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated this week
- ☆51Updated 7 months ago
- Fiber photometry analysis☆22Updated 2 weeks ago
- pyqt5 dependent applications for IBL sessions☆26Updated this week
- R Scripts to analyze deep lab cut point data and related data☆66Updated 2 years ago
- Fiber Photometry Modular Analysis Tool Suite☆38Updated 3 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆57Updated 2 weeks ago
- Browser-based NWB visualization and DANDI exploration☆55Updated this week
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 2 months ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Code package that allows meta analyses of unsupervised behavior results☆16Updated 7 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated 2 weeks ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- ☆34Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated last week
- "Approaches to Study Neural Circuits" course☆65Updated 4 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated last month
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated last month
- Registration of cells across sessions.☆75Updated 8 months ago
- miniscope analysis pipeline with interactive visualizations☆93Updated 9 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆40Updated last week
- Code for Functional Mixed Models for Fiber Photometry☆11Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆72Updated last month
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆22Updated 3 weeks ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year