JingyiGF / HERBSLinks
☆19Updated last year
Alternatives and similar repositories for HERBS
Users that are interested in HERBS are comparing it to the libraries listed below
Sorting:
- ☆52Updated 11 months ago
- Histology processing☆67Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 3 months ago
- Registration of cells across sessions.☆75Updated 11 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 10 months ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Calcium imaging inter-session alignment☆11Updated this week
- Tools to work with Allen Inst CCF data in matlab☆138Updated 3 weeks ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆127Updated last month
- Collection of probe description for probeinterface☆16Updated 3 weeks ago
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- A curated list of awesome Neuropixels resources.☆109Updated this week
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 5 months ago
- Free, platform independent, behavior tracking software.☆138Updated last month
- pyqt5 dependent applications for IBL sessions☆28Updated this week
- Python package to handle probe layout, geometry and wiring to device.☆67Updated last week
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆150Updated this week
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆65Updated last month
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆27Updated 3 weeks ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆36Updated last week
- Fiber photometry analysis☆22Updated 4 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 6 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆61Updated 3 weeks ago
- Tutorials for using SpikeInterface on extracellular datasets.☆66Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆173Updated 2 weeks ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆104Updated 7 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆26Updated last week