Alternatives and similar repositories for ball_in_box

Users that are interested in ball_in_box are comparing it to the libraries listed below

• janelia-cellmap / cellmap-segmentation-challenge
  Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for …
  ☆33Updated this week
• funkelab / lsd
  🌈
  ☆56Updated 2 months ago
• zaritskylab / DISCOVER
  Visual interpretability of image-based classification models by generative latent space disentanglement
  ☆12Updated 11 months ago
• JackieZhai / awesome-vem-datasets
  Open source volume electron microscopy (vEM) datasets for connectomics.
  ☆13Updated 6 months ago
• peterhpark / neuroclear
  Neuroclear is a deep-learning-based Python module to train a deep neural network for the task of applying super-resolution to degraded ax…
  ☆29Updated 2 months ago
• seung-lab / DeepEM
  Deep Learning for EM Connectomics
  ☆15Updated 2 years ago
• lmbneuron / D-LMBmap
  ☆37Updated last year
• HenriquesLab / NanoJ-eSRRF
  ☆20Updated last week
• ilastik / nature_methods_multicut_pipeline
  ☆20Updated 4 years ago
• xzluo97 / mutual-information-registration
  Mutual-Information Medical Image Registration: Theory and Examples
  ☆26Updated 2 years ago
• Luchixiang / EMDiffuse
  ☆48Updated 10 months ago
• volume-em / empanada
  Panoptic segmentation algorithms for 2D and 3D electron microscopy images
  ☆2Updated 2 years ago
• OSchoppe / AIMOS
  AI-enabled Mouse Organ Segmentation
  ☆13Updated 4 years ago
• liushuran2 / Bayesian_DPA_TISR
  ☆13Updated 7 months ago
• volume-em / cem-dataset
  Utilities for building and using the CEM dataset for unsupervised pre-training and downstream tasks.
  ☆28Updated 2 years ago
• HuanglabPurdue / INSPR
  in situ PSF retrieval for whole cells and tissues
  ☆11Updated 3 years ago
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆32Updated last year
• funkey / waterz
  Simple watershed and agglomeration library for affinity graphs.
  ☆22Updated 6 months ago
• kirchhausenlab / incasem
  Automated Segmentation of cellular substructures in Electron Microscopy
  ☆17Updated 2 months ago
• sebi06 / czitools
  This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python. In addition it al…
  ☆13Updated 3 weeks ago
• ClearAnatomics / ClearMap
  ClearMap 2 with WobblyStitcher, TubeMap and CellMap
  ☆120Updated this week
• MIC-DKFZ / napari-nninteractive
  ☆73Updated last month
• bwittmann / vesselFM
  A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.
  ☆66Updated this week
• unidesigner / groundtruth-drosophila-vnc
  Segmented anisotropic ssTEM dataset of neural tissue
  ☆24Updated 11 years ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆56Updated this week
• seung-lab / corgie
  Command line tool for registration of very large 3D volumes.
  ☆14Updated last year
• hongxiangharry / Stochastic-IQT
  This is an example demo on how to enhance low-field MRI by means of the simulated HCP data.
  ☆14Updated last year
• Sentinal4D / cellshape
  3D shape analysis using deep learning
  ☆24Updated last year
• mpriessner / CAFI
  Combined Repos from DAIN and Zooming SlowMo
  ☆21Updated last year
• eguomin / regDeconProject
  code of the registration and deconvolution project
  ☆34Updated 3 years ago