unidesigner / groundtruth-drosophila-vncLinks
Segmented anisotropic ssTEM dataset of neural tissue
☆27Updated 12 years ago
Alternatives and similar repositories for groundtruth-drosophila-vnc
Users that are interested in groundtruth-drosophila-vnc are comparing it to the libraries listed below
Sorting:
- Python scripts to read and write the CREMI hdf5 file format.☆39Updated 2 years ago
- Deep Learning Registration of the Prostate☆56Updated last year
- This repository contains the code necessary in order to reproduce the work contained in the submitted paper: "Segmentation of Nuclei in H…☆53Updated 5 years ago
- Interactive Segmentation of Nucleus☆66Updated 3 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆74Updated 4 years ago
- ☆22Updated 4 years ago
- Accepted by ISBI 2022 (Oral)☆39Updated 3 years ago
- Morphological organ segmentation for CT scans☆22Updated 5 years ago
- Software used by the AGH team during the ANHIR challenge.☆28Updated 5 years ago
- ☆92Updated 6 months ago
- Domain Adaptive Mitochondria Segmentation via Enforcing Inter-Section Consistency☆16Updated 2 years ago
- StarDist PyTorch☆47Updated 3 years ago
- This executable file is used for 3D brain MRI registration☆25Updated 6 years ago
- This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their mo…☆66Updated 4 years ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆124Updated 3 months ago
- Code used to create the DeepHistReg submission to the ANHIR challenge.☆31Updated 8 months ago
- CNN based segmentation codes☆48Updated 2 years ago
- Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…☆71Updated 3 years ago
- nnInteractive plugin for Napari - nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points,…☆103Updated 2 months ago
- Implementation of the DeepVesselNet deep learning network☆152Updated 2 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆74Updated 11 months ago
- Library for generating images by sampling a GMM conditioned on label maps☆27Updated last year
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆173Updated last month
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆172Updated 3 years ago
- H&E histopathological staining normalization☆110Updated 5 years ago
- ☆30Updated last year
- Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology☆75Updated 5 years ago
- [WACV 2024] AnyStar: Domain randomized universal star-convex 3D instance segmentation☆17Updated 3 months ago
- ☆67Updated last year
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆260Updated 2 weeks ago