Alternatives and similar repositories for py-ard

Users that are interested in py-ard are comparing it to the libraries listed below

• ababaian / bioFreelancers
  Freelance bioinformaticians directory
  ☆9Updated 2 years ago
• stjude-rust-labs / fq
  Command line utility for manipulating Illumina-generated FASTQ files.
  ☆87Updated 5 months ago
• Novartis / pisces
  PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using …
  ☆30Updated last month
• COMBINE-lab / simpleaf
  A rust framework to make using alevin-fry even simpler
  ☆57Updated 3 months ago
• fulcrumgenomics / fqgrep
  Grep for FASTQ files
  ☆99Updated 4 months ago
• HussainAther / awesome-alternative-splicing
  Alternative splicing resource
  ☆56Updated 7 years ago
• aldringsvitenskap / epigeneticclock
  Calculate DNA methylation age using Horvath 2013 method
  ☆10Updated 7 years ago
• SACGF / cdot
  Transcript versions for HGVS libraries
  ☆33Updated 2 weeks ago
• mlin / spVCF
  Sparse Project VCF: evolution of VCF to encode population genotype matrices efficiently
  ☆58Updated last year
• brentp / fraguracy
  overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites
  ☆33Updated 2 months ago
• fulcrumgenomics / guide-counter
  A better, faster way to count guides in CRISPR screens.
  ☆32Updated 4 months ago
• genepi / nf-gwas
  A nextflow pipeline to perform state-of-the-art genome-wide association studies.
  ☆71Updated 4 months ago
• biocore-ntnu / epic2
  Ultraperformant reimplementation of SICER
  ☆57Updated 3 years ago
• jackh726 / bigtools
  A high-performance BigWig and BigBed library in Rust
  ☆100Updated 2 months ago
• linnil1 / HLA_collections
  A script to run HLA typing tools from next generation sequencing data
  ☆12Updated 2 years ago
• nf-core / airrflow
  B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
  ☆66Updated this week
• KarchinLab / 2020plus
  Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests
  ☆49Updated last year
• UMCUGenetics / sturgeon
  Sturgeon is a CNS neural network classifier
  ☆38Updated 8 months ago
• google / best
  Bam Error Stats Tool (best): analysis of error types in aligned reads.
  ☆137Updated 5 months ago
• pachterlab / kma
  Keep Me Around: Intron Retention Detection
  ☆29Updated 6 years ago
• lkuchenb / MultiHLA
  WES HLA Typing based on multiple alternative tools
  ☆19Updated 4 years ago
• sstadick / perbase
  Per-base per-nucleotide depth analysis
  ☆137Updated 2 weeks ago
• snakemake-workflows / dna-seq-varlociraptor
  A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, …
  ☆86Updated this week
• SciLifeLab / NGI-RNAseq
  Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.
  ☆51Updated 6 years ago
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 5 years ago
• brentp / rare-disease-wf
  (WIP) best-practices workflow for rare disease
  ☆60Updated last year
• gagneurlab / absplice
  ☆39Updated last month
• ben-laufer / DMRichR
  A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…
  ☆44Updated last year
• broadinstitute / gtex-viz
  GTEx Visualizations
  ☆64Updated 4 years ago
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 2 years ago