Extract methylation calls from long reads (ONT/ PacBio)
☆22Dec 19, 2025Updated 3 months ago
Alternatives and similar repositories for methylong
Users that are interested in methylong are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pangenome-based structural variation caller☆22Jan 20, 2026Updated 2 months ago
- Efficient merging of structural variants from multiple SV callers and samples☆33Feb 27, 2026Updated 3 weeks ago
- Regenotyping structural variants through an accurate and efficient force-calling method☆26Nov 28, 2025Updated 3 months ago
- Extremely fast and accurate Nanopore demultiplexing☆84Mar 10, 2026Updated 2 weeks ago
- ☆38Jan 14, 2026Updated 2 months ago
- ☆10Nov 24, 2025Updated 4 months ago
- A collection of softwares to handle and model PacBio kinetic signal data and predict epigenetics modifications.☆10Mar 4, 2024Updated 2 years ago
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆13Jun 3, 2025Updated 9 months ago
- Scripts to create, manage and backup Wordpress on Podman.☆10Nov 28, 2023Updated 2 years ago
- Collection of tools for the analysis of CpG data☆110Jul 9, 2025Updated 8 months ago
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆82Jan 20, 2026Updated 2 months ago
- plasmidVerify: plasmid contig verification tool☆15Apr 30, 2020Updated 5 years ago
- Implementation of the TreeShrink problem☆55Sep 13, 2024Updated last year
- ☆10Mar 11, 2025Updated last year
- Wrapper for "docker run" to handle systemd quirks☆13Oct 9, 2018Updated 7 years ago
- nf-core/phyloplace is a bioinformatics best-practice analysis pipeline that performs phylogenetic placement with EPA-NG.☆12Nov 20, 2025Updated 4 months ago
- An awesome tool to visualize snakemake rule graphs☆29Mar 12, 2026Updated last week
- Create equal-area histograms with 'ggplot2'☆10Jul 23, 2023Updated 2 years ago
- Assembly and intrahost / low-frequency variant calling for viral samples☆15Feb 12, 2020Updated 6 years ago
- ☆16Aug 1, 2022Updated 3 years ago
- ☆21Feb 12, 2026Updated last month
- PHP-FPM 7.1 on CentOS 7☆12Apr 21, 2018Updated 7 years ago
- Scripts and Snakemake pipeline used in the EMBL-ABR webinar☆13Jul 24, 2019Updated 6 years ago
- Demo of a templated systemd user service that runs rootless Podman and starts MariaDB with socket activation☆18Jul 19, 2023Updated 2 years ago
- Phasing for metagenomics using PacBio long reads☆16Jul 14, 2021Updated 4 years ago
- Compare the quality of multiple genomes, along with their annotations.☆20Updated this week
- JourniPlan is an open-source travel planner and micro journaling app built with Elixir and Phoenix LiveView. Plan your trip, track your e…☆10Feb 2, 2026Updated last month
- Matrix bot plugins for Maubot 🍢 Add link previews, choose, and other tools to your Matrix chat ☕☆17Mar 1, 2026Updated 3 weeks ago
- A new high-resolution long-read metagenome assembler for even noisy reads☆124Updated this week
- Colour and fill scales for 'ggplot2' using colour spaces.☆15Feb 24, 2021Updated 5 years ago
- A bioinformatics tool for viewing and calculating base modification frequencies from BAM files☆42Updated this week
- A Manjaro Linux respin based on the popular 'awesome window manager'☆23Nov 19, 2014Updated 11 years ago
- Assembly and scaffolding of haploid / unphased genomes from long ONT or PacBio HiFi reads☆33Nov 20, 2025Updated 4 months ago
- Makes distinct TSS of each gene from a Gencode annotation☆10Oct 19, 2016Updated 9 years ago
- fork of dorado that supports S/BLOW5☆12Jan 8, 2026Updated 2 months ago
- Plots three different color schemes on the top-left and bottom-right triangles and the diagonal of a symmetric matrix☆12Jul 11, 2021Updated 4 years ago
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆11Nov 27, 2020Updated 5 years ago
- Create replication agreements between 389DS server instances☆13Apr 1, 2025Updated 11 months ago
- data frames that print as ggplots☆14Oct 13, 2020Updated 5 years ago