Alternatives and similar repositories for NegBio

Users that are interested in NegBio are comparing it to the libraries listed below

• stanfordmlgroup / chexpert-labeler
  CheXpert NLP tool to extract observations from radiology reports.
  ☆383Updated 2 years ago
• yuhaozhang / summarize-radiology-findings
  Code and pretrained model for paper "Learning to Summarize Radiology Findings"
  ☆82Updated 6 years ago
• bionlplab / negbio2
  High-performance tool for negation and uncertainty detection in radiology reports
  ☆16Updated last year
• MIT-LCP / mimic-cxr
  Code, documentation, and discussion around the MIMIC-CXR database
  ☆279Updated 4 years ago
• stanfordmlgroup / CheXbert
  Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERT
  ☆133Updated last year
• imonban / RadiologyReportEmbedding
  Intelligent Word Embeddings of Free-Text Radiology Reports
  ☆24Updated 6 years ago
• umassbento / ehrbert
  A fine-tuned BERT using EHR notes.
  ☆14Updated 5 years ago
• gmichalo / UmlsBERT
  ☆98Updated 3 years ago
• lsy3 / clinical-notes-diagnosis-dl-nlp
  ☆70Updated 3 years ago
• bionlplab / radtext
  Python Radiology Text Analysis System
  ☆14Updated last year
• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• kbressem / bert-for-radiology
  BERT implementation for radiology full-text reports
  ☆11Updated 4 years ago
• kormilitzin / med7
  ☆217Updated 6 months ago
• kexinhuang12345 / clinicalBERT
  ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
  ☆420Updated 2 years ago
• ncbi-nlp / BioWordVec
  ☆152Updated last year
• abachaa / VQA-Med-2019
  Visual Question Answering in the Medical Domain VQA-Med 2019
  ☆86Updated last year
• simonlevine / clinical-longformer
  ☆38Updated 3 years ago
• mmcdermott / chexpertplusplus
  Source implementation and pointer to pre-trained models for Chexpert++, a BERT-based approximation to CheXpert for radiology report label…
  ☆20Updated 4 years ago
• suamin / ICD-BERT
  ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)
  ☆75Updated 2 years ago
• Machine-Learning-for-Medical-Language / cnlp_transformers
  Transformers for Clinical NLP
  ☆25Updated last week
• NYUMedML / DeepEHR
  Chronic Disease Prediction Using Medical Notes
  ☆269Updated 5 years ago
• aisinai / rad-report-annotator
  ☆24Updated 2 years ago
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆45Updated last year
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆78Updated 2 years ago
• asappresearch / clip
  ☆29Updated 3 years ago
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆94Updated last year
• som-shahlab / ehr-rwe
  Weak supervision methods for extracting real world evidence from EHRs
  ☆34Updated 5 years ago
• ncbi-nlp / BLUE_Benchmark
  BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.
  ☆296Updated 3 years ago
• som-shahlab / trove
  Weakly supervised medical named entity classification
  ☆73Updated 2 years ago
• AnthonyMRios / pymetamap
  Python wraper for MetaMap
  ☆174Updated 4 years ago